KEGG   Mus musculus (house mouse): 107686
Entry
107686            CDS       T01002                                 
Symbol
Snrpd2, 1810009A06Rik, SMD2
Name
(RefSeq) small nuclear ribonucleoprotein D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107686 (Snrpd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    107686 (Snrpd2)
   03032 DNA replication proteins [BR:mmu03032]
    107686 (Snrpd2)
Spliceosome [BR:mmu03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107686 (Snrpd2)
  U2 snRNP components
    107686 (Snrpd2)
 Complex B
  U1 snRNP components
    107686 (Snrpd2)
  U4/U6.U5 tri-snRNP components
    107686 (Snrpd2)
 Complex C
  U2 snRNP components
    107686 (Snrpd2)
DNA replication proteins [BR:mmu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107686 (Snrpd2)
SSDB
Motif
Pfam: LSM Hfq NUMOD4 GIT1_C Ldh_1_C
Other DBs
NCBI-GeneID: 107686
NCBI-ProteinID: NP_081219
MGI: 98345
Ensembl: ENSMUSG00000040824
UniProt: P62317 Q14AF6
Position
7:18883370..18886659
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagtctcctcaataaacccaagagtgagatgaccccagaggagctgcagaagcgggag
gaggaggaattcaacacaggtcccctctcagtgctcacgcagtcggtcaagaacaacacg
caagtgctcattaactgtcgcaacaacaagaagctgctgggccgggtgaaggcctttgac
aggcactgcaacatggtgctggaaaatgtgaaggagatgtggactgaggttcccaagagc
ggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctacatctccaagatgttc
ctgcgcggggactcggtcatcgtggtgctgcggaacccactcatcgctggcaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (105)   

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