KEGG   Mus musculus (house mouse): 12939
Entry
12939             CDS       T01002                                 
Symbol
Pcdha7, Cnr4, Crnr4
Name
(RefSeq) protocadherin alpha 7
  KO
K16493  protocadherin alpha
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mmu03036]
    12939 (Pcdha7)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mmu04515]
    12939 (Pcdha7)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    12939 (Pcdha7)
Cell adhesion molecules [BR:mmu04515]
 Cadherins
  Protocadherins
   12939 (Pcdha7)
SSDB
Motif
Pfam: Cadherin Cadherin_tail Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 12939
NCBI-ProteinID: NP_034087
MGI: 1298369
Ensembl: ENSMUSG00000104318
UniProt: Q91Y13
Structure
Position
18:37106864..37320716
AA seq 946 aa
MRIKRQQFEMVNLRGYNWKSQQLLLFLIIVAAWEAGSGQLHYSVPEEAKHGTFVGRIAQD
LGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVD
RPLQVFHVEVEVKDINDNPPMFPATQKALFILESRLLDSRFPLEGASDADVGSNALLTYR
LSTNEHFSLDVPPNHEQVKPLGLVLRKPLDREEAAEIRLLLTATDGGKPELTGTVQLLIT
VLDVNDNAPVFDRSLYTVKLPENVPNGTLVIKVNASDLDEGVNGDVMYSFSSDVSSDIKS
KFHMDTVSGEITVIGIIDFEESKAYKIPLEARDKGFPQLPGHCTILVEVVDANDNAPQLT
VSSLSLPVSEDSQPGRVVTLISVFDRDSGANGQVTCSLTPHIPFKLVSTFKNYYSLVLDS
ALDRETIANYDVIVTARDGGSPSLWATASVSVEVADVNDNAPLFAQPEYTVFVKENNPPG
AHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELL
QFQVSARDAGVPALGSNVTLQVFVLDENDNAPTLLGPLANGVGGTMNEVVSRALVPGQVV
AKVRAVDEDSGYNAWLSFELQPVAGGVRSPFRVGLYTGEISTTRALEETDALRQCLLVLV
KDHGEPSLTATATVLLSLVDSGQTQKVSSKVSAGASRVDQRLVDVNVYLIIAICAVSSLL
VLTLLLYTALRCSATPTDGACAPGKPMLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMA
FSPSLPQGPSSTDNPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSS
ATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPA
NNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq 2841 nt   +upstreamnt  +downstreamnt
atgagaataaaacgtcagcaatttgaaatggtaaacctgagaggatacaactggaagagc
caacaattactcctgttcctgataattgtggcagcctgggaggcagggagcggccagctc
cactactccgtcccagaggaagccaaacacggcaccttcgtgggccgcatcgcgcaggac
ctggggctggagctgacggagctggtgccccgcctgttcagggtggcgtccaaggaccgc
ggggaccttctggaggtaaatcttcagaatggcattttgtttgtgaattctcgcatcgac
cgggaggaactgtgcgggcggagcgcggagtgtagcatccacctggaggtgatcgtggac
aggccgctgcaggttttccacgtggaggtggaggtgaaggacattaatgacaaccctccc
atgtttccagcgacacaaaaggctctgtttatcctggagtccagactgcttgactcgcgg
tttccactagagggcgcgtcagatgcagatgtcggttccaatgctctgctgacttacaga
ctgagcaccaatgaacatttctctctggatgtaccgcccaaccacgagcaggtgaaacct
cttgggctggttttgcggaaacctttagacagagaagaagctgcagagattcgcttattg
ctcacggccaccgacggaggcaaaccggagctgacaggcaccgttcaattactcatcacc
gtgctggatgtcaatgacaatgctccagtttttgacagatctctgtatactgtgaaattg
ccagaaaacgttccaaatggaacattggtaatcaaagtcaatgcctcagatttggacgaa
ggcgtgaatggggacgttatgtactcattttctagtgatgtttcttcagatataaaatcc
aagttccacatggacactgtgagtggagagattacagttataggaattattgatttcgaa
gagagtaaagcttacaagattccattggaggcacgtgataaagggttcccacaactgcct
ggacactgtaccattcttgtggaagttgtagatgctaatgacaacgctccacagttgacg
gttagttccttgtctctcccagtatccgaggacagtcaacctggaagagtcgtcacttta
attagcgtatttgaccgtgattccggtgccaatgggcaggtgacctgctccctgactcct
catatccccttcaagctggtgtccacattcaaaaattactattcgctcgtgctggacagt
gctctggaccgagagaccatcgctaactatgatgtgattgtgaccgctcgcgatggcggt
tcgccctccctgtgggccacggccagcgtgtccgtggaggtggctgatgtgaacgacaat
gctccactgtttgcgcagcctgaatacacggtgttcgtgaaggagaacaacccgcctggt
gcgcacatctttacagtgtcagcgatggatgctgatgcgcaggagaatgcgctggtgtcc
tactcgctggtggaacggagggtgggcgagcgcttgctgtcgagctatgtgtctgtgcac
gcggagagcggcaaggtgttcgctctgcagcctctggaccatgaggagctggaactgctg
cagttccaggtgagcgcgcgggatgctggtgtgcctgccctgggcagcaatgtgactctg
caggtgtttgtactggacgagaacgacaatgcacctaccctgctggggcctttggctaac
ggggttggtggcacaatgaatgaggtagtatcaagagctttggtgcctggtcaggttgtg
gcgaaagtccgggccgtagatgaggactctggatacaatgcgtggttgtcttttgagctg
cagccagttgcgggtggagttcgtagtcccttccgtgtaggcctgtacacaggagaaatc
agcacgacacgtgctctggaggagacagatgccttgcggcagtgcttgttagtgttggtg
aaagatcacggagaaccttctctgaccgccacagccacggtgttgctttctctggtagac
agcggccaaacacagaaggtctcatctaaggtgtcagctggagcctccagagtggatcag
aggctggtggatgtcaacgtgtacctgatcatcgccatctgcgcggtgtccagcctgttg
gtgctcacgctactgctgtacacagcgctgcgctgttcggcgacgcccaccgatggagcc
tgtgctccagggaagcccatgctggtgtgctccagcgcggtggggagctggtcatactcg
cagcagaggcgacagagagtgtgctctggagaaggcccacccaagaccgacctcatggcc
ttcagccccagcctacctcagggtcccagctctacagataacccccggcagcccaaccct
gactggcgctactctgcctcgctaagagcaggcatgcacagctctgtgcacctggaggag
gctggcattctacgggctggtccaggagggcctgatcagcagtggccaacagtatccagt
gcaacaccagaacctgaggcaggagaggtgtcccctccggtgggcgccggtgtcaacagc
aacagctggacctttaaatacggaccaggcaaccccaaacagtccggtcccggtgagttg
ccagacaaattcattatcccaggatctcctgcaatcatctccatccggcaggagcctgct
aacaaccaaattgacaaaagcgattttataaccttcggcaaaaaggaggagaccaagaaa
aagaagaaaaagaagaagggtaacaagacccaggagaaaaaagagaaagggaacagcacg
acggacaacagtgaccagtga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
3D Structure (1)   
   PDB (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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