KEGG   Mus musculus (house mouse): 15398
Entry
15398             CDS       T01002                                 
Symbol
Hoxa13, Hd, Hox-1.10
Name
(RefSeq) homeobox A13
  KO
K09298  homeobox protein HoxA/B/C/D13
Organism
mmu  Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmu03000]
    15398 (Hoxa13)
Transcription factors [BR:mmu03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    15398 (Hoxa13)
SSDB
Motif
Pfam: HoxA13_N Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 15398
NCBI-ProteinID: NP_032290
MGI: 96173
Ensembl: ENSMUSG00000038203
UniProt: Q62424
Structure
Position
6:complement(52235833..52237865)
AA seq 386 aa
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPH
PAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAAAAYSSAPGEAPPSAAAAA
AAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP
CARMGPHPNAIKSCAQPASAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPYHH
HQPVPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQTQPPHLW
KSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLS
ERQVTIWFQNRRVKEKKVINKLKTTS
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgacagcctccgtgctcctccacccccgctggatcgagcccaccgtcatgtttctctac
gacaacggcggcggcctggtggccgacgagctcaacaagaacatggaaggggcggcggcg
gcggcagcggcggcggccgcggcggcggcggcgggagctgggggcgggggcttcccccac
ccggctgccgcggccgcggggggcaacttctcggtggccgcagcggccgccgccgccgcc
gccgccgcggccaaccagtgccgcaacctgatggcgcatcccgcacccctggcgcccggc
gccgcggccgcgtacagcagcgccccgggggaggcgcccccgtccgccgccgccgccgcc
gccgccgccgctgctgccgccgccgccgcggctgccgcgtcgtcgtcgggagggcccggg
ccggcggggcccgcgggtgccgaggccgccaagcagtgcagtccctgctcggcggcggca
cagagctcgtcggggcccgcggcgctgccctacggctacttcggcagcggctactacccg
tgcgcccgcatgggcccgcaccccaacgccatcaagtcgtgcgcgcagcctgcttcggcc
gccgccgccttcgccgacaagtacatggacaccgccggccccgcggccgaggagttcagc
tcccgcgccaaggagtttgctttctaccatcagggctacgcagccgggccttaccaccat
caccagcccgtgcccggctacctggatatgccagtagttccggggctcgggggtcctggc
gagtcgcgccacgagcctctggggcttcccatggaaagctatcagccctgggctctgccc
aacggctggaacggccaaatgtactgccccaaagagcagacgcagcctccccacctctgg
aagtccactctgcccgacgtcgtctcccatccttcagacgccagctcctataggaggggg
agaaagaagcgcgtgccttacactaaggtgcagttgaaagaactcgaacgggaatacgct
acgaacaaattcattaccaaggacaaacggaggaggatatcagccacgacaaacctctct
gagaggcaggtcacaatctggttccagaacaggagggtcaaagagaaaaaagtcatcaat
aaactcaagaccactagttaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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