KEGG   Mus musculus (house mouse): 20220
Entry
20220             CDS       T01002                                 
Symbol
Sap18, C530046K05Rik, D11Ertd539e, EMegR4, Sap18a, Sinbp1
Name
(RefSeq) Sin3-associated polypeptide 18
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03013  Nucleocytoplasmic transport
mmu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    20220 (Sap18)
   03015 mRNA surveillance pathway
    20220 (Sap18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmu03019]
    20220 (Sap18)
   03036 Chromosome and associated proteins [BR:mmu03036]
    20220 (Sap18)
Messenger RNA biogenesis [BR:mmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     20220 (Sap18)
Chromosome and associated proteins [BR:mmu03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     20220 (Sap18)
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 20220
NCBI-ProteinID: NP_033145
MGI: 1277978
Ensembl: ENSMUSG00000021963
UniProt: O55128 E9Q317 Q4FZH3
Structure
Position
14:58035646..58042437
AA seq 172 aa
MLAAGVGGQGERLPGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHH
RMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFMDLKRPGY
RVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPSSGRMRPY
NT seq 519 nt   +upstreamnt  +downstreamnt
atgctcgccgcaggggtcggaggtcagggcgagcgtctcccgggccgaaggaggaagatg
gcggtggagtcgcgcgttacccaggaggaaattaagaaggagccggagaagccgatcgac
cgcgagaagacctgcccgctcctgctgcgggtcttcaccaccaacaacggccgccaccac
cgaatggacgagttctcccgcgggaacgtgccttcgagcgagctgcagatctacacctgg
atggatgcaaccttgaaagaactgactagtttagtgaaggaagtctacccagaagccaga
aagaagggcacacacttcaattttgcaattgtttttatggatcttaaaagacctggatat
cgagttaaggagattggcagcaccatgtctggcaggaagggcactgatgactccatgacc
ctgcagtcacagaagttccaaataggggattatctggacatagccatcacgcctccaaat
cgggcgccgccttcgtcagggaggatgagaccctactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
3D Structure (3)   
   PDB (3)   
Protein domain (1)   
   Pfam (1)   
All databases (52)   

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