KEGG   Mus musculus (house mouse): 209540
Entry
209540            CDS       T01002                                 
Symbol
Rtl9, Gm385, Mar9, Mart9, Rgag1
Name
(RefSeq) retrotransposon Gag like 9
Organism
mmu  Mus musculus (house mouse)
SSDB
Motif
Pfam: Retrotrans_gag DUF4939
Other DBs
NCBI-GeneID: 209540
NCBI-ProteinID: NP_001035524
MGI: 2685231
Ensembl: ENSMUSG00000085584
UniProt: Q32KG4
Position
X:141841655..141888326
AA seq 1367 aa
MADMSIPLHSLRFNNMMKEENGDPQNRGATFSRPMTETRAEVQILHSQLQLPVVSTSASD
LEGTSTQLMTSPGFDSLSTPLMGAPHSGTLSPPLMSASDSGTLSPLLMPASDSGTLSPLL
MPVSDSGTLSPLLMPASDSGTLSPLLSTSDYGLMSPGMMSIPDFGTMSSLMAAPDSAEIS
PLAMPIQSSGVISAPIMSTSSSEASLMLGSDPGEISPLLIPDMNPGVTSTPPMTAPGSEA
MSPLQITDEDTEAMSKVLMTALASGEISSLLMSGTDSEAISSLIMSALASGETPAQPTNP
PESEGIPTVLMSGSDSAVMSSLPMPVSGSGAMPTPLLSIPDAGEIATLPKPVPDVEAMSP
LLMTALTSTVMPSQLISASSSGVMSPDTTQNINSEVMSAPPIRVSSTGLMSTLPVRASDT
AATPIQLMRVPASGNMSTSQKTVPVSGSMSTPLMAVTSPGAIFTEQMPSTASGTMSTHLT
MPQTPGTMPIGFMKSTSNGAVSAQQIRCSVSGMMSTQPVIATASEIMSVSQSTVPTSGSV
STQKTRAPVSGPMSTTQIRTTASALTSTPQMRATASGTMSIPLMTAKTSGSASTLLMRDT
ASGVISVPQMRAPGSGTVSKPLMTSKASGMFMQQMTTAAFGATPTSLMRDTASGGLSMPQ
MTDPASGGMSTLLTRATASGTKSTSQMTATTSGGIFMPQTRLSGPGATSTPLMRATASEK
MPSQAMNIQDSGGVSTPLMRPVALGGVQMRSQGSGTMSTPLLRASDSSEMSMLLTKAPSS
GERPLLLVRPPASGEIAPHSRTPVYGTISAPHMTTTASGVMTMSPMKTSVPVSESATLLR
PTDSGVMSIPLTRTPASRAKSRPQMATACGDMCPLPVRAPATAGISPSPVRSPASSTLST
LLRRPSDGAVTAELERVLGPAQFAAMTPGEMSKPLMRASAPGTTTMPLMSPMTSGEMSMP
LMKTTPSGTMSTLQTKVMSSRATSLPQPRNAASGVIANPPQRAPASGAGSTPLMRVSGSG
MMSTPLLGATASGGMSMPQMAPPTSGDMFSPLMRSPAPGIMSTPQTAFGMTPTLNVKATD
SGEASTSHTRFTAPGSKSTPHMTSTAPEMKTPPPKEVPSFGMLTPALCYLLEEQEAARGS
SSVEEDAEEIDEEKQMKGFLDDSEKMAFLVSLHLGAAERWSILQMEVGNPISSDNKAFLR
RSQGLYDSLSEIDILSAVLCHPKQGKKSVRQYATDFLLLARHLSWSDAILRTRFLEGLSE
AVTTKMGRIFLKVAGSLKELIDRSLYTECQLAEEKDSSGNSNQVVPTSCKRNNEEAMENE
LGSQQQTEEHQHVPKRCYYLKEHGDPQESLHDHLRQSAGLPKAPTNK
NT seq 4104 nt   +upstreamnt  +downstreamnt
atggcagatatgtcaataccattacattcactacgcttcaacaatatgatgaaggaggaa
aatggtgaccctcaaaacagaggggcaactttctctagaccaatgacagagaccagagca
gaagttcaaatcctgcattcacagttgcagttgcctgttgtttcgacttcagcctcagat
ctcgaagggacatctacacagctgatgacatcgccaggctttgacagtctgtccacacct
ctcatgggagcaccacactctgggacgttgtccccaccactgatgtcagcctcagactct
gggacactgtccccactgctaatgccggcctcagattcgggaacactatccccactccta
atgccagtttcagactctggaacactgtctccactgctaatgccagcctcagattcagga
acactgtccccactgttgtctacttcagactatgggttaatgtccccagggatgatgtca
atacctgattttgggacaatgtcatcactaatggcagccccagattctgcagagatatca
ccattggcaatgccaattcagtcctctggagtgatatctgcacctataatgagcacttca
tcctccgaggcatcgttaatgctaggatcagatcctggtgagatatccccactcctgatt
ccagatatgaaccctggagtgacatccacaccaccaatgacagctccaggctcagaagca
atgtccccactgcaaattacagatgaggacacagaagcaatgtccaaagtgctaatgacg
gctctagcttctggagagatatcatcactgctaatgtcaggcacagactctgaagcgata
tcttctctgatcatgtcagctctagcttctggggaaacaccagcccagccaacaaatcct
ccagagtctgaagggatacccactgtgctcatgtcaggctcagactctgcagtcatgtct
tcactgcctatgccagtttctggctctggagcaatgcctacaccactcctgtcaatccca
gatgctggagaaatagccacattaccaaagccagtcccagatgttgaggcaatgtcccca
ctgttaatgacagccctcacctctacagtgatgcccagtcaactgatttcagcatctagt
tctggagtgatgtccccagatacaacacaaaatatcaactctgaggtcatgtctgctcca
ccaataagagtttcatccactggattgatgtccacactacctgtgagagcttctgataca
gcggcaacacccatacagctaatgagagtccctgcctctggaaatatgtctacatcacaa
aagacagttccagtctctggatcaatgtccactccactgatggctgtcacaagccctgga
gcaatattcacagaacaaatgccaagcacagcctctggtacaatgtctacacatttaaca
atgccccaaacacctggaacaatgcccataggttttatgaagtccacatcaaatggagcc
gtttctgcacagcaaattagatgttcagtttctgggatgatgtccacacagccagttata
gctacagcctctgaaataatgtctgtgtcacaatcaacagtcccaacctctgggtcagtg
tccacacagaaaacccgagctcctgtctctggaccaatgtctacaacccaaataagaacc
acagcctcagcgttgacatctacaccacaaatgagagccacagcctccgggacaatgtct
atcccactgatgacagccaaaacctctggatcagcatccacactgttaatgagagacaca
gcctcaggagtgatatccgtgccacagatgagagctccaggctctggaacagtgtccaag
ccactaatgacatccaaagcttctggaatgttcatgcagcaaatgacaactgcagctttt
ggagcaacgcctacatcgctaatgagagacacagcttctggaggtctgtccatgccacag
atgacagatccagcctcaggaggcatgtccacactgctaacaagagccacagcttctgga
acaaagtctacatcacagatgacagccaccacctctggaggcattttcatgcctcaaaca
agactctcaggtcctggagcaacatccacaccactaatgagagccacagcctctgagaag
atgcctagtcaggcaatgaacattcaagactctggaggagtgtccacaccgctcatgaga
cctgttgccttgggaggggtgcaaatgagatcccagggctctggaacaatgtccacaccc
ctattgagagcctcggactcatcagagatgagtatgttgctcacaaaagccccatcctct
ggagagcggcctctgctattagtgagacctccagcttcaggagagatagctccacattcg
agaaccccagtttatgggacaatatctgctccacacatgacgaccacagcctcaggagtg
atgaccatgtcacctatgaagacttctgttcctgtatcagagtcggcaactctcctgaga
cccacagattcaggagtgatgtccataccactgacgagaacaccagcttctagagcaaag
tccagaccacaaatggccacagcttgtggagacatgtgtccactcccagtgcgagctcca
gccactgcagggatctctccatcaccagtcagatcaccagcctcttccaccttgtctaca
ctacttaggagaccctctgatggagctgtgactgcagagttagagagagttctaggccct
gcacaatttgcagctatgaccccgggagagatgtccaagccactgatgagggcttcagcc
cctggaaccacaaccatgcctttgatgtcccccatgacttctggagagatgtctatgcca
ctaatgaaaaccacgccctctgggacaatgtcaactctacaaaccaaagtcatgagctct
agagctacatccttaccacagccaagaaatgcagcttctggggtaatagctaacccccca
cagagagccccagcctctggagcagggtctacaccacttatgagagtctcaggttcagga
atgatgtccacgccactattgggggctacagcttcaggaggaatgtccatgccacaaatg
gcacctccaacctctggagatatgttctcaccactaatgaggtccccggcacctggaata
atgtccacaccacaaacggcctttggaatgacacccactctgaacgtcaaagccacagat
tcgggagaggcatctacctctcacaccagattcacagcccctggctcaaagagcacacca
cacatgaccagcacagcccctgaaatgaagacccccccaccaaaggaagtgccgtccttt
ggtatgttgaccccagcactctgttacctcttagaagagcaagaagcagcccggggctca
tcctctgtggaggaagatgcagaggagattgatgaggagaaacaaatgaaggggttttta
gatgattctgagaaaatggcatttctggtgtctcttcatctgggggcagcagagaggtgg
tccatcttgcaaatggaggtaggaaatcccatctccagtgataataaagctttcttgaga
agatcacagggcttatatgactccctatctgagatagacatcctaagtgctgttctttgc
catcccaagcagggcaaaaagtcagtaaggcagtatgccactgacttcctgctgttggcc
cgacatttgtcttggtctgatgccattctacggaccaggtttctggaaggactctcagaa
gctgttaccaccaaaatgggccgtatcttcctgaaggtggccggcagcctaaaggagctg
atagataggtctctgtatactgagtgccagctggctgaagagaaggattcttcaggcaac
tcaaaccaagttgtgccaacatcctgtaagcggaacaatgaggaggccatggagaatgaa
ctgggctctcagcagcagactgaggagcaccagcatgttcccaaacgctgttactacttg
aaagaacatggagacccccaggaaagtcttcatgaccaccttcgacagagtgcaggcctt
ccgaaggcccctacaaacaagtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG GENES (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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