KEGG   Mus musculus (house mouse): 22190
Entry
22190             CDS       T01002                                 
Symbol
Ubc, 2700054O04Rik, Rps27a, TI-225, Uba52, Ubb
Name
(RefSeq) ubiquitin C
  KO
K08770  ubiquitin C
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03320  PPAR signaling pathway
mmu04120  Ubiquitin mediated proteolysis
mmu04137  Mitophagy - animal
mmu04140  Autophagy - animal
mmu05012  Parkinson disease
mmu05022  Pathways of neurodegeneration - multiple diseases
mmu05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    22190 (Ubc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    22190 (Ubc)
   04137 Mitophagy - animal
    22190 (Ubc)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    22190 (Ubc)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    22190 (Ubc)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    22190 (Ubc)
   05022 Pathways of neurodegeneration - multiple diseases
    22190 (Ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    22190 (Ubc)
Ubiquitin system [BR:mmu04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   22190 (Ubc)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 22190
NCBI-ProteinID: NP_062613
MGI: 98889
Ensembl: ENSMUSG00000008348
UniProt: P0CG50
Structure
Position
5:complement(125463029..125467081)
AA seq 734 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSVTTKKVKQEDRRTFLT
TVSKKSPPCACSWV
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccttaactggtaagaccatcaccctggaggtcgagcccagt
gacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac
atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagag
tccaccctgcacctggtccttcgcctcagaggtgggatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccatagagaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggccgcaccctgtcagactacaacatccagaaagagtccaccctgcac
ctggtccttcgcctcagaggtggcatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccattgagaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcaccctgtcagactacaacatccagaaagagtccaccctgcacttagtccttcgc
ctcagaggtgggatgcagatctttgtgaagaccctgacaggcaaaaccatcaccctggag
gtcgagcccagtgacaccattgagaatgtcaaggcaaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgcaggcaagcagctggaagatggccgcaccctg
tcagactacaacatccagaaagagtccaccctgcacctggtccttcgcctcagaggtggg
atgcagatctttgtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagt
gacaccatagagaatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgcaggcaagcagctggaagatggccgcaccctgtcagactacaac
atccagaaagagtccaccctgcacctggtccttcgcctcagaggtggcatgcagatcttt
gtgaagaccctgacaggcaagaccatcaccctggaggtcgagcccagtgacaccatagag
aatgtcaaggcaaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgcaggcaagcagctggaagatggccgcaccctgtcagactacaacatccagaaagag
tccaccctgcacctggtccttcgcctcagaggtgggatgcagatctttgtgaagaccctg
acaggcaagaccatcaccctggaggtcgagcccagtgacaccatagagaatgtcaaggca
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgcaggcaag
cagctggaagatggccgcaccctgtcagactacaacatccagaaagagtccaccctgcac
ctggtccttcgcctcagaggtggcatgcagatctttgtgaagaccctgacaggcaagacc
atcaccctggaggtcgagcccagtgacaccatagagaatgtcaaggcaaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgcaggcaagcagctggaagat
ggccgcaccctgtcagactacaacatccagaaagagtccaccctgcacctggtccttcgc
ctcagaggtggcatgcagatctttgtgaagaccctgacaggcaagaccatcaccctggac
gtcgagcccagtgttaccaccaagaaggtcaaacaggaagacagacgtaccttcctcacc
acagtatctaaaaagagccctccttgtgcttgttcttgggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4098)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (4089)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (55)   
   RefSeq(nuc) (1)   
   GenBank (27)   
   EMBL (27)   
3D Structure (9)   
   PDB (9)   
Protein domain (7)   
   Pfam (7)   
All databases (4182)   

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