KEGG   Mus musculus (house mouse): 54125
Entry
54125             CDS       T01002                                 
Symbol
Polm, B230309I03Rik, Tdt-N
Name
(RefSeq) polymerase (DNA directed), mu
  KO
K03513  DNA polymerase mu [EC:2.7.7.7]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    54125 (Polm)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    54125 (Polm)
Enzymes [BR:mmu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     54125 (Polm)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     54125 (Polm)
SSDB
Motif
Pfam: DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 DNA_pol_B_palm NTP_transf_2 BRCT PUF Cdd1
Other DBs
NCBI-GeneID: 54125
NCBI-ProteinID: NP_059097
MGI: 1860191
Ensembl: ENSMUSG00000020474
UniProt: Q9JIW4
Structure
Position
11:complement(5777860..5788831)
AA seq 496 aa
MLPKRRRVRAGSPHSAVASSTPPSVVRFPDVAIYLAEPRMGRSRRAFLTRLARSKGFRVL
DAYSSKVTHVVMEGTSAKEAICWQKNMDALPTGCPQPALLDISWFTESMAAGQPVPEEGR
HHLEVAEPRKEPPVSASMPAYACQRPSPLTHHNTLLSEALETLAEAAGFEANEGRLLSFS
RAASVLKSLPCPVASLSQLHGLPYFGEHSTRVIQELLEHGTCEEVKQVRCSERYQTMKLF
TQVFGVGVKTANRWYQEGLRTLDELREQPQRLTQQQKAGLQYYQDLSTPVRRADAEALQQ
LIEAAVRQTLPGATVTLTGGFRRGKLQGHDVDFLITHPEEGQEVGLLPKVMSCLQSQGLV
LYHQYHRSHLADSAHNLRQRSSTMDAFERSFCILGLPQPQQAALAGALPPCPTWKAVRVD
LVVTPSSQFPFALLGWTGSQFFERELRRFSRQEKGLWLNSHGLFDPEQKRVFHATSEEDV
FRLLGLKYLPPEQRNA
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgcttccgaagcgacggcgagtgcgagctgggtccccacacagcgcggtagcctcttcc
acgccgccctcggtggtgcgcttcccggatgtggccatctaccttgcggagccgcgaatg
ggccgcagccgccgggccttcctcacccgcctggcgcggtccaaaggcttccgcgtccta
gatgcttacagctcaaaggtgacacatgtggtgatggaagggacctcagccaaggaggcc
atctgctggcagaagaacatggatgctctccccacaggctgcccacagccagctctgcta
gatattagctggtttacagaaagcatggcagctgggcagcctgtccctgaggagggccgg
caccacctggaggtagctgagcccaggaaggagcccccagtctcagcgtcgatgccagct
tatgcctgtcagcgcccctcacctctcacacaccataacactctcctctcagaggctctg
gagacgctagcggaggcagcgggcttcgaagccaacgagggccgtcttctctccttctcc
agagcggcctcggtgctcaagtccctgccctgccctgttgcatctttgagccagctgcat
gggctgccctactttggagaacattccactagagtaatccaggagctgctggagcatgga
acatgtgaagaagtgaaacaagtccgttgctcagaaaggtaccagaccatgaagctcttc
acccaggtcttcggggttggggtgaagactgccaaccggtggtaccaggaaggactacga
accctggatgagctcagagagcagccccagagactgacacagcagcagaaagcagggctc
caatattaccaggacctgagcactccagttaggcgagctgatgccgaggctctgcagcag
ttgatagaggcagctgtgagacagaccctgcccggagccactgtcacactgactggcggt
ttccgaagggggaagttacaaggccatgatgtagacttccttatcacccacccagaggag
gggcaagaagtagggctgctgcccaaagtgatgagctgcctacagagccagggactcgtc
ctgtatcaccagtaccaccgcagccatttggcagactcagcccacaacctgcggcagcgg
agctccaccatggatgcttttgagaggagtttctgcatcttgggtttgccacaaccccaa
caggcagctttagcgggggccctgcctccctgcccaacttggaaagctgtgagggtagat
cttgtggtcacgcccagcagccagttcccctttgcccttctgggctggactggctcccag
ttctttgagcgggagctacggcggttcagccgtcaagagaaggggctgtggcttaacagc
catgggctgtttgatcctgagcagaagagagttttccatgcaacttctgaggaagatgtt
ttcagactcctgggcctcaagtaccttcctccagagcagagaaatgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (30)   
   RefSeq(nuc) (6)   
   GenBank (12)   
   EMBL (12)   
3D Structure (6)   
   PDB (6)   
Protein domain (8)   
   Pfam (8)   
All databases (76)   

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