KEGG   Mus musculus (house mouse): 545124
Entry
545124            CDS       T01002                                 
Symbol
Tdg-ps, EG545124, Gm5806
Name
(RefSeq) thymine DNA glycosylase, pseudogene
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    545124 (Tdg-ps)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmu03400]
    545124 (Tdg-ps)
Enzymes [BR:mmu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     545124 (Tdg-ps)
DNA repair and recombination proteins [BR:mmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     545124 (Tdg-ps)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-GeneID: 545124
NCBI-ProteinID: XP_006521693
MGI: 3645587
Ensembl: ENSMUSG00000047347
Position
15:82400497..82403443
AA seq 421 aa
MDAEAALSYSLEQVQALYSFLFQQMMAEVPNMAVMTGQQVPAVAPNMATVTEQQVPTDAP
VQEPAPEAPKRRKRKPRAAEPQEPVEPKKPATSKKSGKSTKSKEKQEKITDAFKVKRKVD
RFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLS
EVQLNHMNDHTLPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVF
NGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYY
IKLKDLRDQLKGIERNADVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYKAAYGGAYGEN
PCNGEPCGIASNGLTAHSAEPRGEAAPGDVPNGQWMAQSFAEQIPSFNNCGTREQEEESH
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggacgcagaggctgcgctcagctattctctggagcaagttcaagctttgtattcattt
ctatttcaacaaatgatggcagaagttcctaacatggcagtcatgactggacagcaggtg
ccagcagtagctcctaacatggcaaccgtgacagaacagcaggtgcccacagacgctcct
gtccaggaacctgcaccagaagctccaaagagaaggaaaaggaaacccagagcagcagag
ccccaggaaccagtggagcccaaaaaacctgctacgtcgaagaaatccggcaagtctaca
aaatcaaaagaaaagcaggagaaaatcacagacgcgtttaaagtgaaaaggaaagtggac
cgcttcaacggcgtctctgaagctgagcttctgaccaagactcttcctgacattttgacc
ttcaatctggatattgtgatcattggcattaacccgggattaatggctgcttacaaagga
catcactaccctgggcctggaaatcacttctggaagtgtctgttcatgtcggggctgagt
gaggtgcagctgaatcacatgaatgaccacaccttacccggcaagtacggcatcggattc
accaacatggtggaacggacgacgccgggcagcaaggatctgtctagtaaagagttccgg
gaaggagggcgcatcctggtgcagaaactgcagaaatatcagccacgaatagcggtgttt
aatggaaaatgtatttatgaaattttcagtaaagaagtttttggagtaaaggttaagaac
ttggaatttgggcttcaaccccacaagatcccagacacagaaactctgtgctacgtcatg
ccgtcgtccagcgccagatgtgctcagtttccccgggcccaggacaaagttcattactac
attaagctgaaggacttgagagaccagctgaaaggcattgaacgcaacgcggacgttcag
gaagtgcagtatacatttgacctgcagcttgcgcaagaggatgcaaagaagatggcagtt
aaggaagaaaagtatgatccaggctataaggcagcttacggcggcgcctatggggaaaac
ccatgtaatggggaaccttgtggcattgcttcaaatgggctaacagcccacagtgcggag
ccgagaggagaagcagcccccggcgatgttccgaatgggcagtggatggcacagtcgttt
gcagagcagatcccttcttttaataattgtgggacccgagagcaggaagaagagagccac
acttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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