KEGG   Mus musculus (house mouse): 66585
Entry
66585             CDS       T01002                                 
Symbol
Snrnp40, 0610009C03Rik, Prp8bp, Wdr57
Name
(RefSeq) small nuclear ribonucleoprotein 40 (U5)
  KO
K12857  Prp8 binding protein
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66585 (Snrnp40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    66585 (Snrnp40)
Spliceosome [BR:mmu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    66585 (Snrnp40)
 Complex C
   U5 SnRNP specific factors
    66585 (Snrnp40)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 eIF2A Cytochrom_D1 WD40_like WDR54 PROPPIN
Other DBs
NCBI-GeneID: 66585
NCBI-ProteinID: NP_079921
MGI: 1913835
Ensembl: ENSMUSG00000074088
UniProt: Q6PE01
Position
4:130253925..130283826
AA seq 358 aa
MIEQQKRKGPELPLVPVKRPRHELLLGAAGAGPGAGPQQATPGALLQAGPPRCSSLQAPI
MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT
DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW
DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT
GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK
IAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEIQ
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgatcgagcagcagaagcgtaagggcccggagctacccctggttcccgtcaagcggccg
cgacatgagttgctgttgggagcggcaggagccggccccggagcggggccgcagcaggcg
actccaggggcattgctgcaggcgggaccgcccaggtgttcttcccttcaagctccaatc
atgctgctctcgggacatgagggggaagtgtactgctgcaagtttcaccccaatggatcc
accctggcttctgcaggatttgaccggctaatactgttgtggaacgtctatggagactgt
gataactatgcgacgttgaagggacacagtggagcagtgatggagctgcactataacaca
gatggcagcatgctcttctcagcgtcgacagacaaaactgtggcggtgtgggatagtgaa
actggggagagagtgaaaaggctaaaggggcatacttcctttgtgaactcctgttaccca
gccaggcggggcccccaacttgtctgtactggcagtgacgatggtacagttaagctttgg
gacatccggaagaaagcagctgtccagacatttcagaacacgtaccaggtgttggctgtg
accttcaatgacacgagcgatcagattatctctggtggaatagataatgacatcaaggtc
tgggacctacgccaaaacaagttaacctacaccatgagaggccatgcagactctgtaact
ggcctgagcttgagttctgaaggctcttatctcctgtccaatgcaatggacaacacagtt
cgtgtctgggatgtccggccatttgctcccaaagagagatgtgtgaagatatttcaagga
aatgtccacaactttgaaaagaacctcctgagatgttcctggtctccagatggaagcaag
atagcagctggctcagcagacaggtttgtgtacgtgtgggacaccacaagccgaagggtc
ctgtacaagctgcctggtcacgctggctccatcaatgaagtggctttccaccccgacgag
cccatcatcctctcagcatccagtgacaagaggctgtacatgggtgagatccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (27)   
   RefSeq(nuc) (1)   
   GenBank (13)   
   EMBL (13)   
Protein domain (8)   
   Pfam (8)   
All databases (55)   

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