KEGG   Mus musculus (house mouse): 74126
Entry
74126             CDS       T01002                                 
Symbol
Syvn1, 1200010C09Rik, D530017H19Rik, Hrd1
Name
(RefSeq) synovial apoptosis inhibitor 1, synoviolin
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu04120  Ubiquitin mediated proteolysis
mmu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    74126 (Syvn1)
   04120 Ubiquitin mediated proteolysis
    74126 (Syvn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmu04121]
    74126 (Syvn1)
Enzymes [BR:mmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     74126 (Syvn1)
Ubiquitin system [BR:mmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    74126 (Syvn1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H zf-C3H2C3 zf-Nse Endonuclease_7 Prok-RING_4
Other DBs
NCBI-GeneID: 74126
NCBI-ProteinID: NP_001158181
MGI: 1921376
Ensembl: ENSMUSG00000024807
UniProt: Q9DBY1 A0A0R4J1R1
Position
19:6096586..6103748
AA seq 612 aa
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPQ
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPPTSTAVSRPSGAA
TTTAAGTSTSAPAPGSVPGPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEET
ASTVVSAAPSTSAPSSEAPTPSPGASPPIPEAEKPPAPESVGIVEELPEDGEPDAAELRR
RRLQKLESPVAH
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgttccgcaccgcagtgatgatggcggccagcctggcgctaaccggggcagtggtggct
catgcctactacctcaaacaccagttctaccccactgtagtgtatttgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttcttcgggcagctgagggcagcagagatggagcaccttctggaacgg
tcctggtacgctgttactgagacttgtttggccttcaccgtttttcgggatgacttcagc
cctcgctttgtggcgctctttacgctgctcctcttcctcaaatgtttccattggttggct
gaagaccgtgtggactttatggaacgcagccccaacatctcctggctcttccactgccgc
atcgtctctctcatgtttctcctgggtatcctggacttcctcttcgtcagccacgcttat
cacagcatcctgacccgtggggcttctgtgcagctggtatttggctttgagtacgccatt
ctgatgaccatggtgcttaccatcttcatcaagtatgtgctgcactccgtggacctccag
agcgagaacccctgggacaacaaggctgtatacatgctctacacggagctgtttacaggc
ttcatcaaggtcctgctgtacatggccttcatgaccatcatgatcaaggtgcacacattc
ccactctttgccattaggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtacccagatgccacc
cccgaggagctccaggcaatggataatgtctgcatcatctgcagagaagaaatggtgact
ggtgctaagagattgccttgcaaccacatctttcacacgagctgcctgcgctcctggttc
cagagacagcagacctgcccgacatgccgcatggatgtcctgcgggcatcgttgccagcc
cagtcaccaccacctcctgagcctgctgaccaaggaccaccccccgcccctcatccccaa
ccgctgctgccacagccccctaatttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggcccccaatgggtccctttccacctgtcccgcctcccccaagctca
ggagaggctgcggcccctccacccaccagtacagccgtttctcggcctagtggagcagcc
accaccacagctgctggcaccagtacttctgccccagcacctgggtctgtacctggccca
gaggctggtcctgcccccggcttccctttccctcctccttggatgggtatgcctctgcct
ccaccttttgccttccccccaatgcctgtgccccctgcgggctttgctggcctaacccca
gaggagctgcgagcactagagggccatgagcggcagcacctggaggcccggctgcagagt
ctgcgcaacatacacacactactggatgctgccatgcttcaaatcaaccagtacctcact
gtgctggcttccctggggccccccaggccagctacttcagtgaaccccactgaagagact
gcctctacagtggtatctgctgccccttccaccagcgcccccagctctgaggctcctacc
ccgtctccgggagcttccccaccaattcctgaagcagaaaagcctcctgctcctgagtca
gtgggcattgtagaggagcttcccgaggatggagagcctgatgctgcagaactccgccgg
cgtcgcctgcagaagctggagtcccctgttgcccactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (34)   
   RefSeq(nuc) (4)   
   GenBank (15)   
   EMBL (15)   
Protein domain (16)   
   Pfam (16)   
All databases (107)   

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