KEGG   Mycolicibacterium neoaurum VKM Ac-1815D: D174_06170
Entry
D174_06170        CDS       T02959                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mne  Mycolicibacterium neoaurum VKM Ac-1815D
Pathway
mne03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    D174_06170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mne03400]
    D174_06170
Enzymes [BR:mne01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     D174_06170
DNA repair and recombination proteins [BR:mne03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D174_06170
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 AAA_22 AAA_11 Viral_helicase1 UvrD-helicase Helicase_RecD SH3_13 PhoH AAA_16 AAA_28 nSTAND3 AAA_25 NTPase_1 Herpes_Helicase T2SSE AAA_5 TrwB_AAD_bind SRP54 AAA_29 DO-GTPase1 NACHT SLFN-g3_helicase CbiA ResIII AAA
Other DBs
NCBI-ProteinID: AHC24194
UniProt: V5X9V8
Position
complement(1273806..1275416)
AA seq 536 aa
MTIEFEAADIHVAQRLTALAGETSAEVMLAVRLAVRALRGGSVCVDLRAAAAEAGLVAEE
WLAAVAASPLAADPPVLRLLGDLLYLDRYWLEEEQVCADVLALVSTRPAGELPDVLRLFP
DAWAEQRAAAQRALTQGLTVLTGGPGTGKTTTVARLLALLAEQAALAGRPAPRIALAAPT
GKAAARLQEAVAEQIGHLDPQDRTRLQGLTATTLHRLLGARPDTSSRFRHHRGNRLPHDV
IVVDETSMVSLTMMARLLEAVRPQTRLLLVGDPDQLASVEAGAVLADLVDGLGTDRVAAL
STSHRFGAQIGTLADAVRTGDADAALDVLTAGGDHIEWSISADGLQDVLSAQALRLREAC
VLGDIDTAQATLEEHRLLCAHRHGPVGVTHWNRQVQRWLTEATGDPLWSTWYAGRPILVT
ANDYGLKLYNGDTGVTVASPAGLRVAVGGQTFKPGRLSEAETMYAMTIHKAQGSQADEVT
VLLPAEDSRLLTRELFYTAVTRARHRVRVVGSEAEVRAAISRQAIRATGLGLRLRR
NT seq 1611 nt   +upstreamnt  +downstreamnt
gtgaccatcgaattcgaggccgcggatatacatgtggcacaacggctgaccgccctggcc
ggggagacctcggccgaggtgatgctggcggtacgactggcggtgcgtgcgctgcgcggc
ggctcggtatgcgtggatctgcgagccgccgccgcggaagccggcctggtggccgaggag
tggttggccgccgtcgcggccagcccgttggccgcggacccgcccgtgttgcggctgctc
ggggacctgctctacctcgataggtactggctggaggaggaacaggtctgcgccgatgtg
ctggcgctggtgtccacccggccggccggtgagcttccggatgtgttgcggctgttcccc
gacgcgtgggccgagcagcgcgccgcggcccagcgggcgctgacccaggggctgacggtc
ctgaccggtgggccgggcaccggcaagaccaccacggtggccaggctgttggcgctgctg
gccgaacaggccgcgttggccggtcggcctgccccgcggatcgcgttggccgcgccgacc
ggcaaggcggcggcccggttacaagaggcggtcgccgaacagatcgggcacctcgacccg
caggatcgcacccgcctgcagggactgacggcgaccaccctgcaccggctgctcggcgcc
cggcccgacacctcgtcgcggtttcgccatcaccgcggaaaccggttgccgcacgacgtg
atcgtggtcgatgagacgtcgatggtgtcgctgaccatgatggcccggctgttggaggcg
gtgcggccacagaccaggctgctgctcgtcggcgatcccgatcagctggcctcggtggag
gccggcgcggtgctggccgatctggtcgacggcttgggcaccgaccgagtggccgcgctg
agcacctcacaccggttcggggcgcagatcgggacgctggccgacgcggtgcgcaccggg
gacgccgatgccgcgctggacgtgctgactgccggcggagatcatatcgagtggtcgata
tcggccgatgggctgcaggatgtgctgtcagcgcaggcgcttcggctccgcgaggcgtgt
gtcctgggagatatcgacaccgcccaggccaccctggaagagcatcggctgctgtgcgcg
caccggcacgggccggtgggggtgacgcactggaaccggcaggtgcagcgctggttgacc
gaggcgaccggtgatccattgtggtcgacgtggtacgccgggcggccgatcctggtgacc
gccaacgactatgggctcaagctctacaacggggacaccggggtgacggtggcctcgccc
gccgggctgcgggtggccgtcggtggccagacgttcaagccggggaggctgtccgaggcg
gagaccatgtacgccatgacgattcacaaggcccagggcagccaggccgacgaggtgacg
gtactgctccccgccgaggattcgcgactgttgaccagggagttgttctacaccgcggtc
acccgggccaggcaccgggtgcgggtggtgggctcggaagccgaggtgcgcgcagcgatc
tcccgccaggccatccgggcgacgggcctggggctgcggttgcgccggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

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