KEGG   Monoraphidium neglectum: MNEG_4938
Entry
MNEG_4938         CDS       T05028                                 
Name
(RefSeq) cullin 4
  KO
K10609  cullin 4
Organism
mng  Monoraphidium neglectum
Pathway
mng03420  Nucleotide excision repair
mng04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MNEG_4938
  09124 Replication and repair
   03420 Nucleotide excision repair
    MNEG_4938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mng04121]
    MNEG_4938
   03400 DNA repair and recombination proteins [BR:mng03400]
    MNEG_4938
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mng04147]
    MNEG_4938
Ubiquitin system [BR:mng04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     MNEG_4938
DNA repair and recombination proteins [BR:mng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      MNEG_4938
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      MNEG_4938
Exosome [BR:mng04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   MNEG_4938
SSDB
Motif
Pfam: Cullin SecA_SW
Other DBs
NCBI-GeneID: 25737815
NCBI-ProteinID: XP_013902037
UniProt: A0A0D2JWC1
Position
Unknown
AA seq 404 aa
MATMTTNGKAKGAAGAKKLVIKPLKQQPKLPANFEQDTWAKLEDAVDAVHCKRTVACSLE
ELYRAVEDMCSHKMQDSLYRRLQAACDAHIQRAMGTLQDQVQLDAVSFLDRADAVWQDYC
AQMLTVRCIFLYLDRTFVEARIVRGLLLLIERERHGEAVDRQLIASLLRMLKDLGLYAGR
FEAPFLAETAAFYKAEGAAKVVECDTAAYMAHCEARLLQEHERSQHYLDSSTRRPLVHEA
EQQLVAAHLPTLLAQGSFAALIDAQRTGDLGRLFDLAARVSGLEALRAAWREYIQAAGSA
IVKDDEKDKDMVDRLLALKGRLEAVLDASFGGSPAFSATLRDALSYALNTRKDKPAELVA
KFIDARLRAGGNKGLSEGELEEALDSALGLFRLINAAQRMVVTS
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggccactatgacaacgaacgggaaggcgaaaggggctgcaggcgctaagaaacttgta
atcaagcccttgaagcagcaacccaagctgccggcaaactttgagcaagacacatgggcc
aagctggaggacgccgtcgatgcggtccactgcaagcgcacggtcgcgtgcagcctggag
gagctgtacagggccgtggaggacatgtgcagccacaagatgcaggacagcctgtacagg
cgcctgcaggcggcctgcgacgcgcatatacagcgggctatggggacgctacaggatcag
gtgcagctggacgcggtgtcgtttctcgaccgcgccgacgcggtgtggcaggactactgc
gcgcagatgctgaccgtgcggtgcatcttcctgtacctggaccgcacctttgtggaggcg
cgcatcgtgcgcggcctgctgctgcttatcgagcgcgagcgacacggcgaggccgtcgac
cgccagctcatcgccagcctgctgcgcatgctcaaggacctggggctgtacgcggggcgc
ttcgaggcgccgtttctggcggagacggcggcgttctacaaggcggagggcgcggccaag
gtggtggagtgcgacacggcggcctacatggcgcactgcgaggcgcggctgctgcaggag
cacgagcgcagccagcattacctagactcgtccacgcggcggccgctggttcacgaggcg
gagcagcagctggtggcggcgcacctgcccacactgctggcgcagggcagcttcgcggcg
ctcattgacgcgcagcgcacgggcgacctggggcggctgtttgacctggccgcgcgcgtc
agcgggctggaggcgctgcgcgccgcgtggcgcgagtacatccaggcggcgggcagcgcc
attgtgaaggatgacgagaaggacaaggacatggttgaccgcctgctggccctcaagggg
cgcctggaggcggtcctggacgcgtccttcggcggctcccccgcgttcagcgccacgctg
cgcgacgcgctgtcatacgccctcaacacgcgcaaggacaagccggccgaactggtcgcc
aagttcatcgacgcgcggctgcgcgcgggcggcaacaaaggcctcagcgagggggagctg
gaggaggcactggactctgccctggggctgttccgcctcatcaacgctgcgcagcgcatg
gtggtcacgtcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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