KEGG   Monoraphidium neglectum: MNEG_5322
Entry
MNEG_5322         CDS       T05028                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
mng  Monoraphidium neglectum
Pathway
mng03020  RNA polymerase
mng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MNEG_5322
  09124 Replication and repair
   03420 Nucleotide excision repair
    MNEG_5322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mng03021]
    MNEG_5322
   03019 Messenger RNA biogenesis [BR:mng03019]
    MNEG_5322
   03400 DNA repair and recombination proteins [BR:mng03400]
    MNEG_5322
Transcription machinery [BR:mng03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     MNEG_5322
Messenger RNA biogenesis [BR:mng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MNEG_5322
DNA repair and recombination proteins [BR:mng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MNEG_5322
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 25738199
NCBI-ProteinID: XP_013901658
UniProt: A0A0D2L704
Position
Unknown
AA seq 157 aa
MFFHIAIEQNVDLEPQYFGPSLRKTIGQKITEKVEGTCSGNYGYIVCVTAITEISKGKIR
SDGSGLATFKVKFGCVTFRPFKGEVLDCIVTSVNKMGFFAEAGPLQIFVSSHLIPEDYEY
SSANDAAYVSRQDGVRIEERAEFCIGTINEDFLGVIT
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtttttccacatagctatcgagcagaatgtagatctagagccgcagtacttcgggcca
tcgctacgaaaaaccattgggcaaaaaatcacggaaaaggtggagggcacctgcagcggt
aattacggctacatagtgtgtgtgaccgcgatcaccgagatcagcaaaggcaagatcaga
tccgacggcagcggcctggcgacgttcaaggtcaagttcgggtgcgtgacgttccggccc
ttcaagggagaggtgctggactgcattgtcacaagcgtcaacaagatgggcttctttgcg
gaggcagggccgctgcaaatattcgtctcgagccatctcatccctgaggactacgaatac
agcagcgccaacgacgccgcctatgtgagccgccaggacggcgtgcgcatagaggagcgg
gcggagttctgcatcgggaccatcaacgaggatttcctcggcgtcatcacctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system