KEGG   Macaca nemestrina (pig-tailed macaque): 105494781
Entry
105494781         CDS       T08765                                 
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
  KO
K13126  polyadenylate-binding protein
Organism
mni  Macaca nemestrina (pig-tailed macaque)
Pathway
mni03015  mRNA surveillance pathway
mni03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mni00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105494781 (PABPC4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105494781 (PABPC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mni03019]
    105494781 (PABPC4)
   03041 Spliceosome [BR:mni03041]
    105494781 (PABPC4)
Messenger RNA biogenesis [BR:mni03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     105494781 (PABPC4)
   mRNA cycle factors
    Stress granule specific factors
     105494781 (PABPC4)
Spliceosome [BR:mni03041]
 Complex C
  Other components
   Complex C specific factors
    105494781 (PABPC4)
SSDB
Motif
Pfam: RRM_1 PABP RRM_5 RRM_7 RRM_occluded RRM_3 ApbA_C
Other DBs
NCBI-GeneID: 105494781
NCBI-ProteinID: XP_011761903
Ensembl: ENSMNEG00000043054
UniProt: A0A2K6DWS0
Position
Unknown
AA seq 660 aa
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGNAPASRGLPTT
TQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLPPRAAVAAAAPRAVAPYK
YASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGAVAAATS
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgaacgctgcggccagcagctaccccatggcctccctgtacgtgggcgacctgcactcg
gacgtcaccgaggccatgctgtacgaaaagttcagccccgcgggccctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggctatgcctacgtcaacttccag
cagccggccgacgctgagcgggctttggacaccatgaactttgatgtgattaagggaaag
ccaatccgcatcatgtggtctcagagggatccctctttgagaaaatctggtgtgggaaat
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatgatactttttct
gcttttggaaacattctatcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcatttgtccacttcgagacccaagaggctgccgacaaggccatcgagaagatgaatggc
atgctcctcaatgaccgcaaagtatttgtgggcagattcaagtctcgcaaagagcgggaa
gctgagctgggagccaaagccaaggaattcaccaatgtttatatcaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctattcagtcagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaataagtggtaaaata
atatttgtaggccgtgcacaaaagaaagtagaacggcaggcagagttaaaacggaaattt
gagcagctgaaacaggagagaattagtcgatatcagggagtgaatctctacattaagaac
ttggatgacactattgatgatgagaaattaaggaaagaattttctccttttggatcaatt
accagtgctaaggtaatgctggaggatggaagaagcaaagggtttggcttcgtctgcttc
tcatctcctgaagaggcaaccaaagcagtcactgagatgaatggacgcattgtgggctcc
aagccactatatgttgccctggcccagaggaaggaagagagaaaggctcacctgaccaac
cagtatatgcaacgagtggctggaatgagagcacttcctgccaatgccatcttaaatcag
ttccagcctgcggcgggtggctacttcgtgccagcagtcccacaggctcagggaaggcct
ccatattatacacctaaccagttagcgcagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
actcttcgccatctggctccaactggtaatgctccggcctctcgtggcctccctactacc
actcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggcgttcccacagctgtgcag
aacttaccgccacgcgctgctgttgccgctgctgctccccgtgctgttgccccctacaaa
tacgcctccagtgtccgcagccctcatcctgccatacagcctctgcaggcaccccagcct
gcggtccatgtgcaggggcaggagccactgactgcctccatgctggctgcagcacccccc
caggaacagaagcagatgctgggagaacgcttgttcccactcatccaaacaatgcattca
aacttggctgggaagatcacgggaatgctgctggagatcgacaactctgagctgctgcac
atgttagagtcccccgagtctctccgctccaaggtagatgaagctgtagcagttctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcgctgttgctgctgctacctct
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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