KEGG   Micromonas pusilla: MICPUCDRAFT_14737
Entry
MICPUCDRAFT_14737 CDS       T02696                                 
Symbol
JGI:MicpuC2_14737
Name
(RefSeq) uncharacterized protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_14737 (JGI:MicpuC2_14737)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_14737 (JGI:MicpuC2_14737)
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MICPUCDRAFT_14737 (JGI:MicpuC2_14737)
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 Zeta_toxin AAA_25 AAA_23 TsaE AAA_28 nSTAND3 RsgA_GTPase AAA_16 NACHT AAA_15
Other DBs
NCBI-GeneID: 9682106
NCBI-ProteinID: XP_003057091
JGI: 14737
UniProt: C1MNE6
Position
Unknown
AA seq 297 aa
MTAVTAPAAEPPTDNATDTGSLKIRALAYAYPGGESILNDVTLDLPPGSRCLLSGANGAG
KSTLLQILAGKTMVDRDAVRVIGKPPFHEIELTCSGDLGYLGSQWRRTIGSAGSVALAGD
FTAGKMIFGVEDVDPERRARLVQLLDIDLDWSMMKVSDGQRRRVQICMGLLKPFKVLLCD
EITVDLDILGRLDLLEFLKSECEERGATVVYATHIFDGMEPWMTHVAFVSNGALAHGGRK
SDVVGLKGVKHLLGTIDAWLRVDRDERRAREAIAATAPKKTATDRFSNVSRHMGYYR
NT seq 894 nt   +upstreamnt  +downstreamnt
atgaccgccgtaaccgctcccgccgcggagccgccgaccgacaacgccaccgacaccggg
tcgctcaagatcagagccctcgcgtacgcgtaccccggcggcgagtcgatcctgaacgac
gtcacgctggacctccctcccgggtcgcgatgccttctcagcggcgcgaacggcgcgggt
aagagcacgctgcttcagatcctcgcggggaagacgatggtggaccgagacgcggtccgc
gtcatcgggaagccgccgttccacgagatcgagctcacgtgcagcggcgacctggggtac
ctcgggtcgcagtggcgtcgcaccatcggcagcgcgggctccgtcgcgctcgcgggcgac
ttcaccgcgggcaagatgatcttcggcgtcgaggacgtcgaccccgagcgtcgcgcgcgc
ctcgtccaactcctcgacatcgacctcgactggagcatgatgaaagtctccgacggccag
cgaagacgcgtgcagatctgcatggggctcctcaagccgttcaaagtcctcctctgcgac
gagatcaccgtggacttggacatcctcggccgattagacctcctcgagtttttaaagtcc
gagtgcgaagaacgcggcgccaccgttgtgtacgccacgcacatcttcgacggcatggag
ccgtggatgacgcacgtcgcgttcgtgtccaacggcgcgctcgcgcacggcgggcgcaag
tccgacgtcgtcgggctcaagggcgtgaaacacttgctcgggacgatcgacgcgtggctg
cgcgtggacagggacgagaggcgggcgagggaggcgattgcggcgacggcgccgaagaag
acggcgacggatcggttctcgaacgtgtctcgacacatggggtactaccggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

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