KEGG   Methylibium petroleiphilum: Mpe_A2003
Entry
Mpe_A2003         CDS       T00470                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
mpt  Methylibium petroleiphilum
Brite
KEGG Orthology (KO) [BR:mpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mpt03009]
    Mpe_A2003
Enzymes [BR:mpt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     Mpe_A2003
Ribosome biogenesis [BR:mpt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Mpe_A2003
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 NfeD
Other DBs
NCBI-ProteinID: ABM94961
UniProt: A2SHC2
Position
complement(2146031..2147035)
AA seq 334 aa
MATEPAEADEPAEPLAGDAEQRQARVDAGAHGERLDRWLATLAGEFSRNHLQTLIEGGQV
RIDGQTVTARARRVSAGQQIEITLLPTPESQAFRPEPVALPVVFEDAHLLVIDKPAGLVV
HPAPGNWSGTVLNGLLAHHAGAAALPRAGIVHRLDKDTSGLMVVAKTLPAMTSLVRAIAA
REVHREYLALVHGVLRQAVFSVDAPIGRDPVSRIKMAVLAGGRTARTDVELIAARDAVSA
VRCTLHTGRTHQIRVHMASRGHALLADALYGGRPGLGLTRQALHAHRLGFVHPASLQPIE
FSAVPPDDLRAAWQQIVGGSHAPGHDTDTIVVQG
NT seq 1005 nt   +upstreamnt  +downstreamnt
gtggccaccgagccggccgaggccgacgagcccgccgaaccgctggcgggcgatgccgag
caacgccaggcgcgggtcgatgccggcgcccacggcgagcgtctcgatcgctggctggcg
acgctggcgggcgagttctcccgcaaccacctgcagacgctgatcgagggcgggcaggtc
cgcatcgacgggcagaccgtcaccgcccgcgcacggcgcgtcagtgcgggccagcagatc
gagatcacgctgctgcccacgccggagagccaggccttccggcccgagccggtggcgctg
ccggtggtgttcgaggacgcccatctgctggtcatcgacaagccggccggtctggtggtg
cacccggcgcccggcaattggtcgggcaccgtgctcaacggcctgctggcgcatcacgcc
ggcgcggcggcgctgccgcgggccggcatcgtgcaccggctcgacaaggacaccagcggc
ctgatggtggtggccaagacgctgccggccatgacgtcactggtgcgtgcgatcgccgcg
cgggaggtgcatcgcgagtacctggccctggtgcacggtgtgctgcgccaggcggtcttc
agcgtcgacgcgccgatcggtcgcgatccggtgtcgcgcatcaagatggccgtgctggcg
ggcggccggacggcgcgcaccgatgtcgagttgatcgcggcgcgcgacgccgtcagcgcg
gtgcgctgcacgctccacaccggccgcacgcaccagatccgggtgcacatggcctcgaga
ggacatgccctgttggccgacgcgctgtacggtggccgacccggactcggcctgacgcga
caggcgctgcatgcgcaccggctgggcttcgtccatccggcgagcctgcagccaatcgag
ttcagcgccgtcccgcccgacgacctgcgcgcggcctggcagcagatcgtgggcgggtcg
cacgcgcccggccacgatacagatacaatcgtcgtgcagggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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