KEGG   Myroides profundi: MPR_1545
Entry
MPR_1545          CDS       T03631                                 
Name
(GenBank) ATP-dependent RNA helicase DeaD
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
mpw  Myroides profundi
Pathway
mpw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MPR_1545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpw03019]
    MPR_1545
   03009 Ribosome biogenesis [BR:mpw03009]
    MPR_1545
Enzymes [BR:mpw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MPR_1545
Messenger RNA biogenesis [BR:mpw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MPR_1545
Ribosome biogenesis [BR:mpw03009]
 Prokaryotic type
  rRNA helicases
   MPR_1545
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII MatB CoA_binding_2
Other DBs
NCBI-ProteinID: AJH14727
UniProt: A0A0B5RWK0
Position
complement(1734647..1736530)
AA seq 627 aa
MNNFEQLGLNESLLSAIKDMGFENPSEIQQKAIPLLLEKDTDIVALAQTGTGKTAAFGFP
LIQKIDVSNKNTQGLILSPTRELCLQIANEIKQYSKYVKGLHSVAVYGGASITEQAKDVK
RGAQIIVATPGRMQDMINRGMVNIKNINYCILDEADEMLNMGFYEDITSILADTPKEKNT
WLFSATMPQEVARIAREFMKTPEEITVGHKNQGNTNVSHEFYLVSARDRYPALKRLADAN
PDIFSVVFCRTKRDTQSIAEKLIEDGYNAAALHGDLSQAQRDAVMKSFRGKQIQMLVATD
VAARGIDVDDITHVVNYQLPDEIETYTHRSGRTGRAGKSGTSMVIVTKSELRKIQQIERI
IKTKFEEKPVPSGIEICEIQLFHLANRIKEVEVNTEIEAYLPAITELLKDFDKEEIIKKV
VSVEFNRFLEYYQKASNSLSSVSAGRNNSKEVPTDGAVRFFVNLGAKDNLDWMTLKDFLR
DTLELGRDDLFKVDVKDGFSFFNTEAEHAEKVMETLNGLEYQGRRVNVEISNNDGGRNGG
RRDHNNRKGGFRGGERRSEGGFRGGERRSSNRSSEGGFRGGERRSDRSSSEGRGERRSDR
SSERAPRNERGSRRSSEGDSSRRTRRN
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgaacaatttcgaacaattaggattaaatgaatctcttttatctgcgatcaaggatatg
ggatttgaaaatccatcagagatccagcaaaaggcgattccattactattagagaaagat
accgacattgttgcgttagcccaaacggggactgggaaaaccgcagcttttggttttcct
ttgattcagaagatagacgtttctaataagaatacacaaggtcttatcttatcgccgact
agagagttatgtttgcaaatcgcaaacgaaatcaaacagtactcgaagtatgtaaaagga
cttcattcagtagctgtttatggaggggctagcattacagaacaggcaaaagacgtaaaa
cgtggagcacaaattatcgtcgctactcctggtagaatgcaagacatgattaaccgtggt
atggttaacattaaaaacattaattactgtatcctagatgaagcagatgaaatgcttaac
atgggattctatgaggatatcacgtctattttagcggatactccaaaagaaaaaaacaca
tggttattctctgctactatgccgcaagaggttgcgcgcatcgcaagagagtttatgaaa
actccagaagaaattactgtaggtcataaaaaccaaggtaatactaatgtaagtcatgaa
ttttatttagtatctgctagagaccgctacccagcgcttaaacgtttagcagatgcaaat
ccagatattttctctgtagtgttctgtagaacaaagagagatacgcaatctattgctgaa
aaacttatcgaggatggatacaacgctgctgcattacacggagacttatctcaagctcaa
cgtgacgcagtaatgaaatcattccgtggtaaacagatacaaatgcttgtagctactgac
gttgctgctcgtggtatcgacgtagatgacattactcacgtagtaaactaccaattacct
gacgaaatcgaaacgtatactcaccgtagtggacgtactggacgtgctggtaaatcaggt
acttctatggttatcgtaacgaaaagtgaattaagaaaaattcaacaaatcgaaagaatc
atcaaaactaaatttgaagagaaaccagttccatctggaattgagatttgtgaaattcaa
ttgttccacttagcgaatagaattaaagaagtagaagttaacacagagattgaggcttat
ttacctgcaattactgagttattaaaagacttcgacaaagaagaaatcattaaaaaagta
gtttctgttgaatttaatagattcttagaatactaccaaaaagcttctaacagcttatct
agtgtatctgctggaagaaacaattctaaagaagttcctacagacggagcagtacgtttc
ttcgttaacttaggtgctaaggataacttagactggatgacgttaaaagatttcttacgt
gatactttagagttaggtcgtgatgacttattcaaagttgatgtaaaagatggtttctca
ttcttcaacactgaagctgaacacgctgaaaaagtaatggaaacattaaacggtcttgaa
tatcaaggacgccgtgtgaatgttgaaatttctaacaatgatggtggtagaaacggtgga
cgccgtgaccataacaaccgtaaaggtggattcagaggtggagaaagaagatctgaaggt
ggatttagaggtggtgaaagaagatcatctaatagatcatctgaaggaggattcagaggt
ggagagagaagatcggatagatcatcatctgaaggacgtggagaaagaagatcagacaga
tcatcagaaagagctcctcgtaacgaacgcggatctagaagaagtagcgaaggagattca
tctagaagaactagaagaaactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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