KEGG   Meiothermus ruber DSM 1279: Mrub_1822
Entry
Mrub_1822         CDS       T01193                                 
Name
(GenBank) 3' exoribonuclease
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
mrb  Meiothermus ruber DSM 1279
Pathway
mrb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mrb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mrub_1822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mrb03019]
    Mrub_1822
   03016 Transfer RNA biogenesis [BR:mrb03016]
    Mrub_1822
Enzymes [BR:mrb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Mrub_1822
Messenger RNA biogenesis [BR:mrb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Mrub_1822
Transfer RNA biogenesis [BR:mrb03016]
 Prokaryotic type
  tRNA degradation factors
   Mrub_1822
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase S1_2
Other DBs
NCBI-ProteinID: ADD28580
UniProt: D3PSZ7
Position
complement(1872780..1874924)
AA seq 714 aa
MNEENPIPQARRYSVDVGGRTLTIETGKYAKHVSGSVWVTYGETVVMATAQASDAPIQAD
FLPLTVEFEERHYAVGRIPGSFMRREGRPGEKAILSARLTDRPIRPLFPKGFRHEVQVLL
TVLSADQENTPDILGPIAASAALMLSDIPWEGPIASVRVGLQNGRLVLNPVAQEDSQLDL
VVAGSKEAIIMVEAGAQEVSEDRLVEALEFAHRAMQPILELQEQMRAELGKPKFAYEPPA
KLDADTQATLYQRAVEKGLSSVLQTASKGERSAALEAFRQTLLEELVPPAEDGSVDQERR
KLVAEGFDEVVKQELRRLILQENKRADGRTPTQVRPIWIESNVLPKTHGSAIFSRGETQV
LGVVTLGTGRDAQLVDDLGIETEDPFLVHYNFPPYSTGEVRRLRGVSRREVGHGNLAKRG
LRAVLPSREEFPYTIRVVGDVLESNGSSSMATVCAGCLALLDAGVPLKKHVAGVAMGLVK
EGEQAVVLTDILGLEDALGDMDFKVTGTRDGVTALQMDIKIKGLTPEIMRAALYQAREAR
LHILSLMERAVPTHRAEMKPHVPRILTLKVNPDKIGGIIGPGGKNIRQLEELGVEIDIEQ
DGTIRLYSASAAAAEEAKARILGQTAEAKVGEIYEGTVTRITNFGAFIEILPGKDGLLHI
SQLAQGRVQKVEDVLSLGQKIKVKVNSIDEQGRVDLIRPELEGLIAPRKPPVRR
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgaacgaggaaaatccaataccccaggcacgacgctacagcgtggacgtcggggggcgc
acactcaccatcgagaccggcaaatacgccaagcacgtgtccggctcggtctgggtaacc
tatggcgaaaccgtggtgatggcgaccgcccaggcctccgacgcgcccattcaggccgat
tttttacctctgacggtggagtttgaagagcggcactacgccgtcgggcgcattccgggt
agctttatgcggcgggaggggcggccaggtgaaaaagccattctctcagcccgcctgacc
gaccgacccatccggcccctcttccccaagggcttccggcacgaggtgcaggtgctgctg
acggtgctttccgccgaccaggaaaacaccccggacatcctggggcccatcgcagccagc
gcggccctgatgctatcggacatcccctgggagggccccatcgcctcggtgcgggtaggc
ctgcagaatgggcgtctggttttgaacccggtggcccaggaggatagccagctcgatttg
gtggtggccggctccaaagaggccatcatcatggtggaggctggcgcgcaagaggtctcg
gaagaccgcctggtggaggccctcgagttcgcccaccgggctatgcagcccatcctggag
ctgcaagagcagatgcgggccgagctgggcaagcccaagtttgcttacgagcccccggcc
aaactggacgccgatacccaggccaccctgtaccaaagggccgtggaaaaagggctttcc
agcgtgctgcaaaccgcctccaagggtgagcgttcggcggccctcgaggccttccggcag
accttgctggaagagctggttccccccgccgaggatggctcggtagaccaggagcggcgc
aaactggtggccgagggttttgatgaggtggtcaaacaggagctgcgccggctgatccta
caagaaaacaagcgggccgatggtcgcaccccaacgcaggtgcgccccatctggattgaa
agcaacgtgctgcctaaaacgcacggctcggccatcttcagccggggcgagacccaggtg
ctgggcgtggtcacgctgggcaccgggcgcgatgcccagcttgtggacgacctcggcatc
gagaccgaagaccccttcctggtgcactacaacttcccgccctactccaccggcgaggtc
aggcgcctgcgcggggtgagccgccgcgaggtgggtcacggcaacctggccaagcgcggc
ttgcgggccgtgctgccctccagggaggagtttccttacaccatccgggtggtgggcgac
gtgctggagtccaacggctcttccagtatggccacggtgtgcgccggttgtctggccttg
ctggatgctggggttcccctcaagaagcacgtggcgggggtggccatgggcctggtcaag
gaaggtgagcaggcggtggtgctcaccgatatcctgggcctggaggacgccctgggcgac
atggacttcaaggtcacgggcacccgcgacggcgtgaccgcgctccagatggacatcaag
atcaagggcctgacccccgagatcatgcgggcagcgctgtaccaggcccgcgaggcccgt
ttgcacatcctgagcctgatggaacgcgccgtgcccacccaccgcgccgagatgaagccc
catgtgccccgcatcctcaccctcaaggtcaaccccgataaaattggggggattatcggg
cctggtggcaaaaacattcgccagctcgaggagctgggggtggaaatcgacatcgagcag
gacggcaccatccggctctacagtgccagcgcagccgcagccgaagaggccaaagcccgc
atcctgggccagaccgccgaggccaaggtgggtgagatctacgagggcaccgtcacccgg
attaccaatttcggggctttcattgaaattttgccgggtaaggacggtctgctgcacatc
agccaactggctcaagggcgggtgcaaaaggtcgaggatgtgctttcgctgggccagaag
attaaggtcaaggtcaacagcatcgacgagcaggggcgggtggatctgattcgtccggag
ctcgagggcctgatcgccccacgcaaaccccctgttcgacgataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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