KEGG   Methylobacterium radiotolerans: Mrad2831_4288
Entry
Mrad2831_4288     CDS       T00674                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mrd  Methylobacterium radiotolerans
Pathway
mrd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Mrad2831_4288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mrd03021]
    Mrad2831_4288
   03019 Messenger RNA biogenesis [BR:mrd03019]
    Mrad2831_4288
Transcription machinery [BR:mrd03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Mrad2831_4288
Messenger RNA biogenesis [BR:mrd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Mrad2831_4288
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_22 NACHT AAA_25 AAA ATPase_2 AAA_14 Spore_III_AA DUF6360
Other DBs
NCBI-ProteinID: ACB26255
UniProt: B1M3B5
Position
complement(4538773..4540059)
AA seq 428 aa
MPAALEGVREVKLQDLKSKTPTDLTAFAEEVEVENASTMRKQELMFAILKQLAAKEVEII
GSGTVEVLQDGFGFLRSSDSNYLPGPDDIYISPTQIRRFGLRTGDTVEGPIRGPKDGERY
FALLKVNTINFENPEKIKHKVHFDNLTPLFPTKRFKLELDNPTKKDFSPRIIDIVAPIGK
GQRALIVAPPRTGKTVLMQNIAQSITLNHPECYLIVLLIDERPEEVTDMQRSVKGEVIAS
TFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVD
ANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKVS
DKRIFPAIDITRSGTRKEELLVPPDSLKKTYVLRRILNPMGVTDAIEFLLDKLRQTKSNS
DFFDSMNT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgccggccgccctcgagggcgtccgcgaggtcaagctccaggacctcaaatcgaagacg
ccgaccgacctgacggccttcgccgaggaggtcgaggtcgagaacgcctcgaccatgcgc
aagcaggagctgatgttcgccatcctgaagcagctcgctgccaaggaggtcgagatcatc
gggtcgggcaccgtcgaggtgctgcaggacggcttcggcttcctgcgctcctccgactcg
aactacctgcccggcccggacgacatctacatctcgccgacccagatccgccgcttcggc
ctgcggaccggcgacaccgtcgagggcccgatccgcggccccaaggacggcgagcgctac
ttcgcgctgctcaaggtcaacacgatcaacttcgagaacccggagaagatcaagcacaag
gtccacttcgacaacctgacgccgctcttcccgacgaagcggttcaagctcgagctggac
aacccgaccaagaaggacttctcgccgcggatcatcgacatcgtggcgccgatcggcaag
ggccagcgcgccctgatcgtggcgccgccgcgcacgggtaagaccgtgctgatgcagaac
atcgcccagtcgatcaccctcaaccacccggagtgctacctgatcgtgctgctcatcgac
gagcggcccgaggaggtcaccgacatgcagcgctcggtgaagggcgaggtcatcgcctcg
accttcgacgagccggccacccgccacgtgcaggtcgccgagatggtgatcgagaaggcc
aagcgcctcgtggagcacgggcgcgacgtggtgatcctcttggactccatcacccgcctc
ggccgcgcctacaacaccgtggtgccgtcctccggcaaggtgctgaccggcggtgtcgac
gccaacgccctgcagcggcccaagcgcttcttcggcgcggcccgcaacatcgaggagggc
ggctcgctctcgatcatcgccacggcgctgatcgacaccggctcgcgcatggacgaggtg
atcttcgaggagttcaagggcaccggcaactccgagatcatcctggaccgcaaggtctcc
gacaagcgcatcttcccggcgatcgacatcacccgctcgggcacccgcaaggaggagctg
ctggtcccgccggactcgctcaagaagacctacgtgctgcgccgcatcctcaacccgatg
ggcgtcaccgacgcgatcgagttcctgctcgacaagctgcgccagaccaagagcaacagc
gacttcttcgactcgatgaacacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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