KEGG   Mycolicibacterium rhodesiae: MycrhN_2625
Entry
MycrhN_2625       CDS       T01685                                 
Name
(GenBank) DNA/RNA helicase, superfamily II
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mrh  Mycolicibacterium rhodesiae
Pathway
mrh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mrh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MycrhN_2625
  09124 Replication and repair
   03420 Nucleotide excision repair
    MycrhN_2625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mrh03021]
    MycrhN_2625
   03400 DNA repair and recombination proteins [BR:mrh03400]
    MycrhN_2625
Enzymes [BR:mrh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MycrhN_2625
Transcription machinery [BR:mrh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MycrhN_2625
DNA repair and recombination proteins [BR:mrh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MycrhN_2625
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AEV73206
UniProt: G8RYC7
Position
complement(2637974..2639623)
AA seq 549 aa
MTDGPLIVQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVTFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVQVHNSERGRVKQMLLKIGWPAEDLAGYVDGEKHPISLAQDGW
HLRDYQEMATDSFWEGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LINRTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMLYAVAEPDERYKLCSTVHSKIAVVKSILEKHKGDQTLVIGAYLD
QLDELGTELNAPVIQGSTKTAEREALFDEFRRGEIPTLVVSKVANFSIDLPEANVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVSRDSLDAEYAAHRQRFLAEQGYGYIIKD
ADDLLGPAI
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgaccgacggccccctgatcgtgcagtccgacaagaccgtgctgctcgaggtcgaccat
gagcaggcgggcgcggcgagagccgcgatcgccccgttcgccgaactcgagcgtgcgccc
gagcacatccacacctaccgcatcaccccgctggcgctgtggaacgcgcgtgccgcgggc
cacgacgccgaacaggtcgtcgacgcgctggtgacgttctcccgctacgcggtaccgcag
ccgctgctcgtcgacatcgtcgacacgatggcgcgctacgggcgcctgcagctggtcaag
tctccggtgcacggcctgacgctggtgagcctggaccgcgcggttctcgaggaggtgctg
cgcaacaagaagatcgcgccgatgctcggcgcccgcatcgacgacgacaccgtccaggtc
cacaacagcgagcgcggccgagtcaagcagatgctgctcaagatcggttggcctgcagag
gatctcgccggatatgtggacggcgagaagcacccgatcagcctcgcgcaggacggctgg
cacctgcgtgactatcaggagatggcgaccgactcgttctgggagggtgggtccggcgtc
gtggtgctgccgtgcggcgcgggtaagaccctcgtcggcgccgcggcgatggcgaaggcg
ggcgcgacgacgctgatcctggtgaccaacactgttgcgggcaggcaatggaagcgcgag
ctgatcaaccggacgtcgttgacggaggacgagatcggcgagtactcgggcgagaagaag
gagatccgcccggtgaccatcgccacctaccaggtgatcacgcgccgcaccaagggtgaa
tacaagcacctcgagctgttcgacagccgcgactggggcctgatcatctacgacgaggtg
cacctgctgcccgcgcccgtgttccggatgaccgccgacctgcagtcgcggcgacggctt
ggcctgacggccacgctgatccgcgaggacggccgcgagggcgacgtgttctcgctgatc
gggccgaagcggtatgacgcaccgtggaaggacatcgaggcccagggctggatcgcgccc
gccgagtgcatcgaggtgcgggtcacgatgaccgacaacgagcggatgctctacgccgtc
gccgagcccgacgagcgctacaagctgtgctcgacggtgcattccaagatcgcggtggtg
aagtcgatcctggagaagcacaagggcgaccagaccctggtgatcggcgcgtacctcgac
cagctcgacgagctcggaaccgaactcaacgccccggtgatccaggggtcgaccaagacc
gcggagcgcgaagcgctgttcgatgagttccgtcgcggcgagatcccgacgctggtggtg
tccaaggtcgccaatttctcgatcgacctaccggaagccaatgttgccgtgcaggtgtcg
ggcaccttcgggtcgagacaggaagaggcgcagcggctgggccggctgttgcggcccaag
gccgacggcggcggcgcgatcttctactcggtggtgtcccgcgacagcctggacgccgag
tacgccgcacaccgtcagcggttcctcgccgaacagggctacggctacatcatcaaggac
gccgacgatctgctcggtcccgcgatctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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