KEGG   Moniliophthora roreri: Moror_6923
Entry
Moror_6923        CDS       T03137                                 
Name
(GenBank) topoisomerase ii
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
mrr  Moniliophthora roreri
Pathway
mrr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mrr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Moror_6923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mrr03019]
    Moror_6923
Messenger RNA biogenesis [BR:mrr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Moror_6923
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     Moror_6923
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-ProteinID: ESK96415
UniProt: V2XV28
AA seq 934 aa
MSFFGFEETDLEKEKQKFLQGKLDPSEGDNLAVYTWGEESYDGLGDALEEGGDDLNNETF
GDTGAVGKDFDFSRSALPGSEDLEPKLFATSHQRTQSPPSQTARPPTAAPLSLESIWDDK
SPFSLRLNGGGRSSTRVQSPPAHQQPIGHATNQTGARTLQEIEAEMRLAAERSREAALHR
ELLIQQQQQRLEEEEYLRQQQEQELLQRQQRYIYRQEQQQQQLQLQRLQQQQILQQREQQ
HHRTPPPRMLPVSQSPRFLEHQRQVLLLQQQQEQRQLLRLQQLEEQLRMEDLERQMRNQQ
ISQIHHGNNQFNHDRHPSGPTLAEMEALQLQQQRELLLRSQSPLRATPAQDNAAFMQPNI
QLQQRILSEMAHAEFLRDMQGLSQADQETLRVEAMRKILEAEKMEEKRRRKAAKIAHMSR
YNDLMTQSDKDFITRIQVSQLVTQDPYADDFYAQVYGAIIRSRMGLGSEDERVLKFGASG
GVGLGVAQRGGNRRPNAMQRMQQQVERIVSNARRREEEKGLHSIHSLQGALGKTSGRSYK
AAPRQLLQVDSGNASSSSPTLSHAQAHGHISKADEAGEFGDDAAAKAAKLGREALAEQHA
PDTSELVRRDPLTRREALVTLETLYDHVLQLEQLKRNPPPEEEAAVTEWENEFQSVLDQT
WTLLKVMVPLATSDPHPFISILSVAKGKKLLPRLTRHLDSQRMLTLLTLLIACFSQLDVV
VDAPLLDAPEETPGRSEVERQTQAFLSGVIQSILPVIAKGSLRLVSGLLGLLLDRNDVVA
IAKTRPGLALLTLFLTRVEVIKESLHNATNLDELPSPEDAEQWQFMFDHLFQLLTPHFPN
LFPSSRTPEAQAGRIQPGMDALDQPVWQFLAALALHAVAEQHQILVTLLRDKVLENVISA
KKGWVVDEEERRAKLANVDLFLHALGLDSSQIAM
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgtcgttttttggattcgaagaaacagacttagaaaaggaaaagcagaaattccttcaa
gggaagcttgatccctccgaaggggacaatttagcggtgtacacatggggcgaagaaagc
tacgatggtcttggtgatgcactggaagagggtggtgacgacctgaataacgagactttt
ggcgatactggtgctgtaggcaaggatttcgacttttccagatctgctcttcctggttcc
gaagacttggagccaaaattgtttgcaacttctcatcagcggacccaatccccaccatct
caaactgctcgaccacccacagcagctccattgtcattggaatccatttgggatgacaag
tctccgttttcgctacgcttgaatggcggtggtcgctcatctactcgtgtacaatcgccg
ccagcacatcagcagcccatcggccatgccacgaatcaaactggcgcccggaccctgcaa
gagattgaagcggagatgcggttagccgctgaacgctcaagagaggctgctttacacagg
gaattactcattcaacagcagcagcagcgcttggaagaggaagagtatcttcgtcagcag
caggagcaggagctgctccaaaggcagcagagatatatttataggcaagaacagcagcag
cagcagcttcagctgcaacgcttgcagcaacagcaaatacttcagcagagagagcaacag
caccaccggactccgccccctcgtatgcttccggtctcgcaatcaccgcgattcctggag
catcagaggcaagtactactgctccagcagcagcaagagcaacggcagcttcttcgcctg
caacaattggaagaacaacttcgtatggaagatcttgaacgtcagatgcgcaaccagcag
atatctcagatccatcatggcaacaaccagttcaatcatgatcgtcatccttctggtccc
actctggcagaaatggaggcgctccagctgcagcagcaacgagagctgctacttcgttct
cagtcgccgctcagagccactcctgcgcaggataatgccgccttcatgcagccaaacatt
caattgcagcaacggatcctctcagaaatggcacatgcagaattccttcgagacatgcaa
ggattgtctcaagcagaccaggaaacgctcagggtggaggcaatgcgtaaaatccttgaa
gctgaaaagatggaagaaaagaggcgacggaaagcggccaagattgcacacatgtcacga
tacaacgaccttatgacccaatcggacaaggactttatcactcgtatacaagtttcccag
cttgttactcaagatccgtatgccgacgacttctacgcgcaggtctatggtgccatcata
cggtcgaggatgggcttgggttcggaggatgagcgcgtattaaagtttggcgctagcggc
ggagtgggtttgggagttgctcaaagaggtggcaaccgaagacccaacgctatgcaacgc
atgcagcagcaggttgagcgtatcgttagtaatgccaggcggcgagaagaggaaaaagga
cttcattcgatccatagtcttcaaggcgccctaggaaagacctctggtcgcagttacaaa
gcggcacccagacagttacttcaggtcgactccggaaacgcttcttcatcgtctcccacg
ttgtctcatgctcaggcgcacgggcatatttccaaagcagatgaggctggggaatttggc
gatgacgctgctgcgaaggccgccaagcttggtcgtgaagcactagccgagcagcatgca
cctgatacctctgaacttgtacgcagggatcctctaactcgtcgggaggccttagtcact
ttggagactctttatgatcacgtccttcaactcgaacagctcaagcggaatccgcccccc
gaggaagaagctgccgtgactgaatgggagaacgagttccagagtgttttggaccaaaca
tggacactactgaaagtgatggttcctcttgctacgagcgaccctcacccattcatctct
atcttgagtgttgcaaagggcaaaaagctcttgcctcgactgacccgccatcttgatagc
caacgcatgctcacgttgctcacgcttctcatcgcatgcttcagccaactcgatgtcgtg
gtcgatgcacctctgttagatgcgccagaagaaaccccgggtcgatctgaggtagaacgt
caaactcaggcattcctttctggcgtgatacaaagtattctgcctgttatcgccaaaggc
agcctacgactggtgtccggattgcttgggctactcctggatcgcaacgacgttgtagct
attgctaagaccaggcccggacttgctttattgaccttgttcttgacgagggtggaggtg
atcaaagagtctttgcataatgcaacaaatctggatgaattaccatcgccagaagatgca
gaacaatggcaattcatgtttgatcacttattccagctcctcacgcctcacttccccaac
ctcttcccatcgagtcgtacgcctgaggctcaagcaggtcggattcaacctgggatggac
gctttggaccaacctgtctggcaattcttggctgcgttggcgctgcatgcggtcgcagaa
cagcaccagattctcgtcactttactgcgggataaggtgctggagaatgttatcagcgca
aagaaaggatgggttgttgacgaggaagagagacgtgcaaaattagcaaacgtagatctt
ttcctgcatgctctggggcttgatagctcacagattgcaatgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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