KEGG   Allomuricauda ruestringensis: Murru_2165
Entry
Murru_2165        CDS       T01598                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mrs  Allomuricauda ruestringensis
Pathway
mrs03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mrs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Murru_2165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mrs03021]
    Murru_2165
   03400 DNA repair and recombination proteins [BR:mrs03400]
    Murru_2165
Enzymes [BR:mrs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Murru_2165
Transcription machinery [BR:mrs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Murru_2165
DNA repair and recombination proteins [BR:mrs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Murru_2165
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C Peptidase_M23
Other DBs
NCBI-ProteinID: AEM71204
UniProt: G2PMA7
Position
2371088..2375386
AA seq 1432 aa
MARIKDNNAQKRFNKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQPGIAKGPEGEEINKMDFLTEEEYLNILESIPTENQY
LEDTDPNKFIAKMGAECLIDILSRIDLEQLSYELRHKANTETSKQRKTEALKRLQVVEAL
RESQNNRENNPEWMIMKVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQEAVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPELKLYECGLPKDMAAELYKPFIIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLACTAFNADFDG
DQMAVHLPLGPEAILEAQLLMLASQNILNPANGSPITVPSQDMVLGLYYMTKEKKSTKEE
PVLGEGLTFYSSEEVEIAFNEKKVSLNAGIKVRAKDFNEEGELVYQIIETTVGRVLFNTE
VPEQAGFINQVLNKKALRNIIGDILAVTDVPTTAEFLDKIKAMGYDFAFKGGLSFSLGDI
IIPAEKQDMIGEANEQVDGIMMNYNMGLITNNERYNQVIDVWTSTNAMLTELAMKRIRED
KQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNSEDCETLRGIEVEPLKKNE
EIVETLGERILGRVSLHDVYNPLTEELVLKAGQEINEADVKRVEAAPIEKIEVRSPLTCE
APQGICAKCYGRNLATNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDNK
LESKFDGIAEIEDLRLVKGENSEGGKTDIVISRTSEVKIVDPKTGITLSTNNIPYGSKLF
IKNGEKITKGTVICEWDPYNGVIVSEFSGQIAYENLDQGVTYQVEIDEQTGFQEKVISET
RNKKLIPTLLIKDSKGETLRSYNLPVGSHLMVDDGEKVKEGKTLVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKTGDIKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILAIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVKIQDPGDTIFLENQLVHKDDFINENDEIFGKKVVEDAGDSERLKPGQILTVREL
RDENSILRREDKTLVTARDAVAATATPILQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKIDTLEGLKENVIVGHKIPAGTGMRDYDSIIVGSKEEYDEIMARKEEFKF
NT seq 4299 nt   +upstreamnt  +downstreamnt
atggctagaataaaagataataacgcacaaaaaaggttcaacaaaatttccataggattg
gcctctccagagtcaattttggccgagtcccgtggcgaggtgttgaagccggaaaccata
aactatagaacgcacaaaccagagcgtgatggattgttctgcgagcgtatttttggtcct
gtaaaggattacgaatgtgcctgtggtaaatacaagagaatccgttaccgtggaatcgtt
tgtgaccgttgtggtgttgaagtgacggagaaaaaagtacgtagagaccgtgtagggcac
attaatcttgtggttcccgtggcacacatctggtacttccgttcgctgccaaacaaaata
ggataccttttgggactgccttccaaaaagttggacatgattatatactacgaaaggtat
gtggttatccagccaggtattgccaaaggtccagaaggtgaggaaatcaacaaaatggat
ttcttgaccgaggaggagtacttgaacattttggaatccattcctaccgagaaccaatac
ttggaggataccgatcccaacaagttcattgccaaaatgggtgccgaatgtttgattgac
attttgtccagaatcgatttggaacaattgtcctacgaacttcgtcataaggcaaacaca
gagacttcaaaacagcgtaagaccgaagccttgaagcgtcttcaggtagttgaggcttta
cgtgagtcacaaaacaacagggaaaacaaccctgagtggatgattatgaaggtgattccg
gtgattccaccagaattgcgtccgttggtgccattggatggggggcgtttcgccacatcc
gatttgaacgacttgtaccgcagggtgattatccgtaacaaccgtttgaagcgtttgatg
gaaatcaaagcaccagaggtgattttgaggaacgaaaaacgtatgcttcaggaagcggtg
gattcccttttcgataacacaagaaaagcatctgcggtaaaaacagaatccaacagacca
ttgaaatccctttccgattcattgaaaggtaagcaaggtcgtttccgtcaaaaccttttg
ggtaaacgtgtggattactccgctcgttccgtaattgttgttgggccggaattgaaattg
tacgaatgtggtcttccaaaagatatggcagccgagctttacaagccattcatcatccgt
aagttgattgaaagaggtattgtaaagaccgttaaatctgccaaaaagattatcgacaag
aaggaacccgtagtttgggacattcttgaaaacgtccttaaaggacaccctgtattgttg
aaccgggcccccacattgcacagattgggtatccaagcgttccagcctaaacttattgaa
ggtaaggcgattcgtttgcatccattggcatgtaccgcatttaacgcggattttgatggg
gaccagatggcagttcacttgccattggggccagaggctattttggaagcacaattattg
atgttggcttcacaaaacatccttaacccagccaacggttctccgattaccgtaccatca
caggatatggttttgggattgtactacatgaccaaagagaaaaaatctaccaaagaagaa
cctgttttgggtgaaggacttaccttctattcttctgaagaagtagagattgcctttaac
gagaaaaaagtttcgcttaatgccggaatcaaggtaagagccaaagactttaacgaagaa
ggggaattggtctatcaaattatagaaaccacggtaggtcgtgtattgttcaacacagaa
gtgccagaacaagcaggattcatcaaccaagtattgaacaagaaagccctaagaaatatt
attggggacattcttgcggtgacagatgtacctacaaccgctgagtttttggacaagatc
aaggccatgggatacgatttcgcctttaaaggtggtctatcctttagtttgggggatatc
atcattccagcagaaaagcaggatatgatcggcgaggcaaacgagcaggtcgatggtatt
atgatgaactataacatgggtcttatcaccaacaatgagcgatataaccaggttattgat
gtttggacatctaccaatgccatgttgaccgaattggccatgaagcgaattcgtgaagat
aaacaaggattcaactcggtatatatgatgttggattctggtgcaaggggttccaaagag
cagattcgtcagttgaccggtatgcgtggtttgatggccaagcctaaaaaatctaccgca
ggtggtggggagattatcgaaaacccgattctttcgaactttaaggaaggattgtcgatt
ttggaatactttatctctacccacggtgcgcgtaaaggtcttgcggataccgctttgaaa
acggcggatgcaggttacttgaccagacgtttggtggacgtttcacaagatgttatcgtt
aatagcgaagattgtgaaaccttgagaggtatcgaggtagaaccattgaagaaaaacgag
gagattgttgaaaccttgggcgaaaggattttgggcagggtatcgttacacgatgtgtac
aacccattgaccgaagaacttgtgctgaaagcaggacaagaaatcaacgaagccgacgtg
aaaagggtggaggcagctccaatcgaaaaaatagaagtaagatctccattgacatgtgag
gctccacaaggaatctgcgccaaatgttacggtagaaaccttgctaccaataaaatggta
caacgaggtgaagccgtaggtgttgttgcagcacagtccattggtgagcccggtacacag
ttgaccttgcgtaccttccacgtgggtggtattgcaggtaacatttccgaggacaacaag
ttggagtccaagtttgatggtattgcagagattgaagacttgagacttgtaaaaggtgaa
aacagtgaaggtggtaaaaccgacattgtaatttccagaacgtccgaggttaagatagtt
gatccaaaaacaggaatcacattaagcacaaacaacattccttacggttctaaattgttc
atcaaaaacggtgagaaaattacaaaaggaaccgtgatttgtgaatgggatccatataac
ggtgtaattgtttctgagttctctggacagattgcctacgagaaccttgatcaaggtgtt
acttaccaagttgaaatcgatgaacaaacaggtttccaagaaaaagtaatttctgagacc
agaaacaaaaagttgattccaaccttgttgatcaaggacagtaaaggcgaaacattacgt
tcttacaatttgcctgttggttcccacttgatggttgatgacggcgagaaagtaaaagaa
ggaaaaacattggttaaaattccacgtaaatctgccaaggcaggggatattaccggtggt
cttccaagggtaaccgagcttttcgaagcacgtaacccatccaacccagccgttgtttcc
gagattgatggagtagtatccttcggtaagatcaagcgtggtaaccgagagattattatc
gagtccaagaccggagatatcaaaaagtacttggttaaattgtccaaccagattttggtt
caggaaaatgactacgtacgtgcaggtatgccattgtccgacggttccattacaccagaa
gacatcttggccattaaaggaccatctgccgtacagcaatatttggtaaacgaagtacaa
gaagtttaccgtttacaaggtgtgaaaattaacgataagcactttgaagttgttgtaaga
caaatgatgcgtaaagttaaaatccaagatccaggagataccatcttcctagagaatcaa
ttggtacacaaagacgactttatcaacgagaatgatgaaattttcggcaaaaaagttgtt
gaggatgctggggattccgaaagattgaaaccaggacagattttgactgtacgagagctg
agggacgagaactcaattctaagaagagaggacaagaccttggtaaccgcaagagatgct
gtggcagcaactgcgacaccaatcctgcaaggtattacaagagcatcgttgcagaccaag
tcctttatctcggcagcatcgttccaggaaaccaccaaagtgttgaatgaggccgcagta
agtggtaaaatcgataccttggaaggattgaaggaaaatgtaattgtaggacataaaatt
ccagccggtaccggcatgagggattatgacagcatcattgtaggttccaaagaggagtac
gatgaaatcatggcccgaaaagaggaattcaaattctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (119)   
   KEGG ORTHOLOGY (1)   
   RefGene (116)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (135)   

Download RDF
DBGET integrated database retrieval system