KEGG   Mycolicibacterium smegmatis MC2 155: LJ00_00025
Entry
LJ00_00025        CDS       T03433                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
msb  Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:msb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msb03032]
    LJ00_00025
   03400 DNA repair and recombination proteins [BR:msb03400]
    LJ00_00025
Enzymes [BR:msb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LJ00_00025
DNA replication proteins [BR:msb03032]
 Prokaryotic type
  DNA Topoisomerases
   LJ00_00025
DNA repair and recombination proteins [BR:msb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LJ00_00025
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c
Other DBs
NCBI-ProteinID: AIU05291
Position
4591..6618
AA seq 675 aa
MAAQKNNAPKEYGADSITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
FATRVDVKIHADGSVEVRDDGRGIPVEMHATGMPTIDVVMTQLHAGGKFDGETYAVSGGL
HGVGVSVVNALSTRLEATVLRDGYEWFQYYDRSVPGKLKQGGETKETGTTIRFWADPEIF
ETTDYNFETVARRLQEMAFLNKGLTIELTDERVTAEEVVDDVVKDTAEAPKTADEKAAEA
TGPSKVKHRVFHYPGGLVDYVKHINRTKTPIQQSIIDFDGKGPGHEVEIAMQWNAGYSES
VHTFANTINTHEGGTHEEGFRAALTSVVNRYAKDKKLLKDKDPNLTGDDIREGLAAVISV
KVAEPQFEGQTKTKLGNTEVKSFVQKICNEQLQHWFEANPAEAKTVVNKAVSSAQARIAA
RKARELVRRKSATDIGGLPGKLADCRSTDPSKSELYVVEGDSAGGSAKSGRDSMFQAILP
LRGKIINVEKARIDRVLKNTEVQSIITALGTGIHDEFDISKLRYHKIVLMADADVDGQHI
STLLLTLLFRFMKPLVENGHIFLAQPPLYKLKWQRSEPEFAYSDRERDGLLEAGRAAGKK
INVDDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVEARR
SFITRNAKDVRFLDV
NT seq 2028 nt   +upstreamnt  +downstreamnt
gtggctgcccagaagaacaatgcgcccaaggagtatggcgccgattccatcaccattctc
gagggtttggaagcggtccgcaaacgtcctggcatgtacatcggctcgaccggcgaacgc
ggtcttcaccacctgatctgggaggtcgtggacaacgcggtcgacgaggcgatggccggg
ttcgccacgcgcgtcgacgtcaagatccatgccgacggcagcgtcgaggtccgcgacgac
ggccgtggcatcccggtcgagatgcacgcgacgggcatgcccaccatcgatgtcgtcatg
acccagctgcacgcgggtggcaagttcgacggcgagacgtacgcggtgtccggtggtctg
cacggcgtgggcgtctcggtcgtgaacgcgctgtcgacgcggctggaggccacggtcctg
cgtgacgggtacgagtggttccagtactacgaccgctcggtgcccggcaagctcaagcag
ggcggtgagaccaaggagaccggcaccaccatccggttctgggcagatccggagatcttc
gaaacgaccgactacaacttcgagacggtcgcgcgccggcttcaggagatggcgttcctc
aacaagggcctgaccatcgagctgaccgacgagcgcgtgactgccgaagaggtggtcgac
gacgtcgtgaaggacaccgccgaagcgcccaagacggccgacgagaaagccgccgaggcc
accgggcccagcaaggtcaagcaccgcgtcttccattacccgggtggtctggtcgactac
gtcaagcacatcaaccgcacgaaaacccccatccagcagagcatcatcgacttcgacggc
aagggtcccggccatgaggtcgagatcgcgatgcagtggaacgcggggtattcggagtcg
gtgcacaccttcgccaacaccatcaacacgcatgagggtggtacgcacgaggagggtttc
cgtgcggcgctgaccagtgtggtgaaccggtatgccaaggacaagaagctgctcaaggac
aaggatcccaacctcaccggtgatgacatccgtgagggtttggcggcggtgatctcggtg
aaggtcgccgaaccgcagttcgagggccagaccaagaccaagctgggcaacaccgaggtc
aagtcgttcgtccagaagatctgcaacgagcagctgcagcactggttcgaggccaaccct
gctgaagcgaaaaccgttgtcaacaaagcggtctcgtcggcgcaggcgcggatcgcggcg
cgtaaggcgcgtgagttggtgcggcgtaagagcgcgaccgacatcggtgggttgccgggc
aagctggccgactgccgttcgacggatccgagcaagtcggagctgtatgtggtggagggt
gactccgcgggtggttcggccaagagtggtcgggattcgatgttccaggcgatcctgccg
ttgcgcggcaagatcatcaacgtcgagaaggcccgcatcgaccgcgtgctgaagaacacc
gaggtgcagtcgatcatcaccgcgctgggcaccggtatccatgacgagttcgacatctcc
aagctgcggtatcacaagatcgtgttgatggccgatgcggatgtggacggtcagcacatc
tcgacgttgttgttgacgttgttgttccggttcatgaagccgctggtggagaacggccac
atcttcttggcgcagccgccgttgtacaagctcaagtggcagcgcagtgagccggagttc
gcctattccgatcgtgagcgcgacgggctgttggaggccgggcgcgcggcgggcaagaag
atcaacgtcgacgacggtatccagcgctacaagggtctcggtgagatggacgccaaggag
ttgtgggagaccacgatggatccgtcggtgcgggtgctgcgacaggtcaccctcgacgac
gccgccgcggccgacgaactgttctccatcctcatgggcgaagacgtcgaggcgcgccgt
agcttcatcacgcgcaacgccaaagacgttcgcttcctggatgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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