KEGG   Mycolicibacterium smegmatis MC2 155: LJ00_34055
Entry
LJ00_34055        CDS       T03433                                 
Name
(GenBank) DNA helicase
  KO
K02314  replicative DNA helicase [EC:5.6.2.3]
Organism
msb  Mycolicibacterium smegmatis MC2 155
Pathway
msb03030  DNA replication
Brite
KEGG Orthology (KO) [BR:msb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LJ00_34055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msb03032]
    LJ00_34055
Enzymes [BR:msb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LJ00_34055
DNA replication proteins [BR:msb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LJ00_34055
SSDB
Motif
Pfam: DnaB_C DnaB LAGLIDADG_3 Intein_splicing AAA_25 TniB PT-HINT ATPase
Other DBs
NCBI-ProteinID: AIU11850
Position
complement(6938044..6941118)
AA seq 1024 aa
MDDLGHPDGPADIDGPPPSGDFGRQPPQDMAAEQAVLGGMLLSKDAIADVLERLRPGDFY
RPAHQSVYDAILDLYGRGEPADAVTVAAELDRRGLLRRIGGAPYLHTLISTVPTAANAGF
YAGIVAEKALLRRLVEAGTRVVQYGYAGADGADVADIVDRAQAEIYDVTERRASEDFVPL
EDLLQPTMDEIDAIASQGGIARGVPTGFTELDEVTNGLHAGQMIIIAARPGVGKALALDT
PLPTPSGWTTMGDVAVGDHLLGPDGEPTRVVADTDVMLGRPCYVVEFSDGTAIVADAQHQ
WPTEHGVRITANLRAGMHTVVSASGGRGGTALLAPAVQITAVRRRPSVPVRCVEVDNPEH
LYLAGPGMVPTHNSTLGLDFMRSCSIKHRMASVIFSLEMSKSEIVMRLLSAEAKIKLGDM
RSGRMTDDDWTRLARRMSEISEAPLYIDDSPNLTMMEIRAKARRLAQKSDLRLIVVDYMQ
LMTSGKKYESRQQEVSDFSRSLKLMAKELDVPVVAISQLNRGPEQRTDKRPQVSDLRESG
CMTANTRILRADTGAEVTFGELMATGERPLVWSLDEHKRMVARPMTNVFPSGRKEVFTLR
MASGREVEATANHPFLTLDGWVPLGELKPGDRLATPRLVPEPVNTQRMHDSEVVMLAHMI
GDGSCVKRQPIRYASIDEGNLLAVETAAEHFGVTPIRDEYAAAQVTTLRLPAPYRLTRGK
RNPIAEWLDKLGLFGKRSYEKFVPAQVFALPNDQVALFLRHLWATDGSVRWDAKVGQGRV
YYATTSRQLADDVVQLLLRVGVYARIKRAKKAGYRDCWHVLIYGRENQKRFVAHVGVHGA
RGAAARDLLAELESVTQDTNLDTVPKEVWSQVKAALIERGMSHRAFAKAMGTQFCGSALW
KHAPSRSRLHRAASLLEDAALHDLATNDVFWDEIVEITSIGEHDVYDGTVPGTHNFVAQG
ISAHNSLEQDADMVMLLHRPDAFDRDDPRGGEADIILGKHRNGPTANITVAHQLHFSRFT
NMAR
NT seq 3075 nt   +upstreamnt  +downstreamnt
gtggacgacctcgggcatccggatggtcccgcggacatcgatggtccgccgccaagcgga
gatttcggccgccagccgccccaggacatggccgccgagcaggctgtcctcggtggcatg
ctgctgagcaaggacgccatcgccgacgtgctggagcggctgcgtccgggcgacttctac
cgtcccgcccaccagagcgtctacgacgcgatcctcgacctctacggccgcggtgagccc
gctgacgcggtcaccgtcgcggccgagctggaccggcgcggtctgctgcgccgcatcggt
ggcgcgccctatctgcacaccctgatctcgacggtgcccaccgcggccaacgctggcttc
tacgccggcatcgtggccgagaaggcgctgctgcgccggctcgtcgaggccggcacacgc
gtcgtgcagtacggctacgccggtgccgacggtgccgacgtggccgacatcgtcgaccgc
gcccaggccgagatctacgacgtcaccgagcgccgcgcctccgaggacttcgtgccgctc
gaggacctgctgcagcccacgatggacgagatcgacgcgatcgcgtcgcagggcggtatc
gcacgcggtgtgcccaccgggttcaccgaactcgatgaggtcaccaacgggctgcacgcc
gggcagatgatcatcatcgcggcgcgtcccggtgtgggtaaggcgctcgcgctcgacacc
ccgcttccgacgcccagcgggtggacgacgatgggcgacgtcgcggtgggtgaccatctc
ctcggccccgacggcgagcccacacgcgtggtggccgacaccgacgtgatgctcgggcgg
ccctgctacgtcgtcgagttctccgacggcacagcgatcgtcgccgatgcgcagcatcag
tggcccaccgagcacggggtccgcatcaccgccaacctgcgtgccggtatgcacaccgtg
gtgagcgcctcgggcggccgtggcggcacggcactgctggccccggcggttcagatcacc
gcggtccgccggcggcccagcgtgcccgtgcggtgtgtcgaggtggacaaccccgagcac
ctgtacctggccgggccgggcatggttcccacgcacaactcgacactcgggctggacttc
atgcggtcgtgctccatcaagcaccgcatggccagcgtcatcttctccctggagatgagc
aagtccgagatcgtcatgcgcctgctgtcggccgaggcgaagatcaagctcggcgacatg
cggtccggccgtatgaccgacgacgactggacgcgtctggcgcggcgcatgagcgagatc
agcgaggcaccgctctacatcgacgactcgccgaacctcaccatgatggagatccgcgcc
aaggcacggcgtttggcgcagaagtccgatctgcggctcatcgtcgtcgactacatgcag
ctgatgacctcgggcaagaagtacgagtcacgtcagcaggaagtctcggacttctcgcga
agcctcaagctgatggccaaagagctcgacgtgcccgtggtggcgatcagccagctgaac
cgtgggcctgagcaacggaccgacaagcgtccgcaggtgtccgatcttcgtgagtcgggg
tgcatgaccgcgaacacccgtatcttgcgcgccgacacgggcgccgaggtcaccttcggc
gagctcatggcaaccggagagcggccgctggtgtggtcgctggacgagcacaagcgcatg
gtcgcgcggcccatgaccaacgtgttccccagcgggcgcaaagaggtgttcacactgcgg
atggcgtcgggccgcgaagtcgaggcaactgccaaccatcccttcctcacgctcgacggc
tgggttccgttgggcgagttgaagcccggtgaccggctcgccacgccccgcctcgtgccc
gaacccgtcaacacccagcgcatgcacgactcggaggtcgtgatgctcgcgcacatgatc
ggcgacgggtcctgcgtgaagcgtcagccgatccgttacgcatcgatcgacgagggaaat
ctgctcgcggtcgagaccgcagcggagcacttcggcgtcacgccgatccgtgacgagtac
gccgcagcgcaggtcaccacccttcggcttcccgcgccgtaccggttgacccgcggtaag
cgcaatccgatcgctgagtggctcgacaagctcggcctgttcggcaagcgcagctacgaa
aagttcgtccccgcccaggttttcgcactgcccaacgaccaggtggcgctgttcctgcgg
catctgtgggcgaccgacggctccgtgcggtgggacgccaaggttgggcagggtcgcgtg
tactacgcgaccaccagccggcagttggctgacgacgttgtgcagctgctgctgcgggtc
ggggtgtacgcgcgcatcaaacgcgccaagaaggccgggtaccgggactgctggcatgtg
ctcatctacggccgcgagaaccagaagcggttcgtggcgcacgtcggtgtgcacggcgca
cggggcgcggccgcacgtgacctgctcgccgagctcgagagtgtcacccaggacacgaat
ctcgacaccgttccgaaagaggtctggtctcaggtcaaggccgcattgatcgagcggggg
atgtcgcaccgtgcgttcgccaaagcgatggggacgcagttctgtgggtccgcgctgtgg
aagcacgccccgagccggtcacggctgcaccgtgctgcgtcgctgctggaggacgctgcg
ttgcacgacctcgccaccaacgacgtgttctgggacgagatcgtcgagatcaccagcatc
ggtgagcacgatgtctacgacggcaccgtgcccggcacgcataactttgtggcgcagggc
atctcagcgcacaacagcctggagcaggacgccgacatggtcatgctgctgcaccggccc
gacgcatttgatcgagacgaccctcgcggcggcgaagccgacatcatccttggcaagcac
cgtaacggtccgaccgcgaacatcactgtggcgcaccagctgcacttttcgcgattcacg
aatatggctcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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