KEGG   Myxococcus stipitatus: MYSTI_01700
Entry
MYSTI_01700       CDS       T02436                                 
Name
(GenBank) nuclease
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
msd  Myxococcus stipitatus
Pathway
msd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:msd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MYSTI_01700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msd03400]
    MYSTI_01700
Enzymes [BR:msd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     MYSTI_01700
DNA repair and recombination proteins [BR:msd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     MYSTI_01700
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AGC43032
UniProt: L7U620
Position
complement(2091789..2092577)
AA seq 262 aa
MPLKVMTFNVLQGGEERFDDIIAFLARTPPDVIVLQECLGWDDGGRLRRVAEALDVPQDE
AHLVLGQSRSRPSGRCYHVAVVSRPPIRSLRVHNDRHFLGHSIVECELEAGGPVTLLGTH
FDAHHEKLRYVEARYLRSILDPARFREGQYLLAGDLNSLSRRDPYPVDLADRLRRAGTDK
FDHPPRFDVIDDVEDYGWVDTLQMRGSPSRWVTARRNRGGVTIDYRTDYVFASPRMAERL
ISTDVIDVGDMSDHNPVVATFR
NT seq 789 nt   +upstreamnt  +downstreamnt
atgccgctgaaggtgatgacgttcaacgtgttgcagggtggcgaggagcggttcgacgac
atcatcgccttcctggctcgcacgcctccggatgtcatcgtgttgcaggagtgtctcggc
tgggatgacggaggccgcctgcgccgggtcgcggaggcgctggacgtgccccaggacgaa
gcgcacctggtgctgggacagtcgcgctcgcgccccagcggccgctgctaccacgtggcc
gtggtgagccgtcccccgattcgctcgctgcgcgtccacaacgaccgccacttcctgggc
cacagcatcgtcgagtgcgagctggaggcgggcggaccggtgacgctcctcggcacccac
ttcgacgcgcatcacgagaagctccgctacgtggaggcgcgctacctgcgctccatcctg
gacccggcgaggttccgcgaaggccagtacctgctggccggagacctcaactcgctctcg
cggagggacccgtacccggtggacctggcggaccgcctgcgccgggcggggacggacaag
ttcgaccacccacctcgcttcgacgtcatcgacgacgtcgaggactatggctgggtggat
accttgcagatgcgcgggtcgccctcgcggtgggtgacggcccggcgcaaccggggcggc
gtcaccatcgactaccgcacggactacgtcttcgcctcgccgcgcatggccgagcggctc
atctccacggacgtcatcgacgtgggtgatatgtccgaccacaatccggtggtagcgaca
ttccgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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