KEGG   Mycolicibacterium smegmatis INHR2: LI98_31080
Entry
LI98_31080        CDS       T03432                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
msh  Mycolicibacterium smegmatis INHR2
Pathway
msh03030  DNA replication
msh03430  Mismatch repair
msh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LI98_31080
   03430 Mismatch repair
    LI98_31080
   03440 Homologous recombination
    LI98_31080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msh03032]
    LI98_31080
   03400 DNA repair and recombination proteins [BR:msh03400]
    LI98_31080
Enzymes [BR:msh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LI98_31080
DNA replication proteins [BR:msh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LI98_31080
DNA repair and recombination proteins [BR:msh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LI98_31080
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 RuvB_N AAA_30 AAA_19 DnaX_C Rad17 TmcA_N AAA_14 Mg_chelatase AAA_16 AAA_18 nSTAND3
Other DBs
NCBI-ProteinID: AIU24523
UniProt: A0A653FAM2
Position
complement(6349543..6351540)
AA seq 665 aa
MALYRKYRPATFSEVVGQEHVTEPLCTALTAGRINHAYLFSGPRGCGKTSSARILARSLN
CDQGPTPTPCGVCDSCVALAPNGPGNVDVVELDAASHGGVDDTRELRDRAFYAPAQSRYR
IFIVDEAHMVTTAGFNALLKIVEEPPDHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPR
TMRPLLERICAEENVEVDDAVYPLVIRAGGGSPRDTLSVLDQLLAGSEQGANGNHITYQR
ALSLLGATDLALIDDAVEALAANDAAALFGAVEAVVDAGHDPRRFATDLLERFRDLIVLQ
AVPDAVTRGVVDAPTDVLERMREQAERLGAGTLTRYAEVVHAGLGEMRGATAPRLLLEVM
CARLLLPSAADTESALLQRIERIETRLDMSIPAGEASSGVAPAEPAKQFVRRSQAAAASP
PAAEPAPATPPTPAAPPTPAAPPAPAVAAPPAPAPAPQAPRPEPPVARPAPEPPPRPAPE
PVAPPPPAAPVPAAAPAAPAPAAETGSVPGQPNAAAVRSMWSTVREKVRQRSRTTEVMLS
GAIVRAVEGDTLVLSHESAPLAKRLTESRNSEVIREALKDALGVNWKVRCVTGAPEAAVA
APPAATGGAAPQAPAPDPVEIARAEEDDMLAEAAAEPSESMPRRDPEEVALELLQNELGA
RRIDG
NT seq 1998 nt   +upstreamnt  +downstreamnt
gtggctctctaccgcaagtaccgcccggcaaccttctccgaagttgttgggcaggagcat
gtcaccgagccgctgtgcactgcgctcaccgcgggccggatcaaccacgcgtacctgttc
tcgggtccgcgcggctgcggtaagacgtcgtcggcgcgcatcctggcccgctcgctcaac
tgtgatcaggggccgacgccgacgccgtgcggcgtgtgcgactcgtgcgtggcgctggcg
cccaacgggcccggcaacgtcgacgtcgtcgaactcgacgcggccagccacggcggtgtg
gacgacacccgcgaactgcgcgaccgcgcgttctacgcgccggcccagtcgcggtaccgc
atcttcatcgtcgacgaggcgcacatggtcaccacggccggcttcaacgcgctgctcaag
atcgtcgaggagccgccggaccacctgatcttcgtgttcgccaccaccgaacccgaaaag
gtgctgccgaccatccgctcgcgcacgcaccactacccgttccgcctgctggcgccccgc
accatgcggccgcttcttgagcgcatctgcgccgaggagaacgttgaggtcgacgacgcc
gtgtatccgctggtcatccgcgccggcggcggatctccgcgtgacacgctctcggtgctc
gaccagctgctggccggttccgagcagggcgccaacggcaaccacatcacctaccagcgc
gcgctgtcgctgctcggggccaccgacctggcgctcatcgacgacgccgtcgaggcgctc
gccgcgaacgacgccgcggcgctgttcggcgccgtggaggccgtggtcgacgcgggccac
gatccgcgccgcttcgccaccgatctgctggaacggttccgcgacctgatcgtgctgcag
gccgtgcccgacgccgtcacccgcggcgtggtcgacgcgcccaccgacgtgcttgagcgg
atgcgtgagcaggccgaacgcctcggggcggggacgctgacccgttacgccgaggtggtg
cacgcgggcctcggcgagatgcgcggtgccaccgcgccgcgtctgctgctcgaagtgatg
tgcgcgcggttgctgctgccgtcggcggccgacaccgaatcggcgctgctgcagcgcatc
gaacgcatcgagacccggctcgacatgtccatcccggccggcgaggcgtcctcgggcgtt
gcgcccgcagaaccggccaagcagttcgtgcgtcgcagccaggccgccgccgcttcgccg
cctgccgccgaacccgcaccggccacgccgcccactcctgccgcgccgcccactcctgcc
gcgccgccggcccccgcagttgccgcgccgcccgcaccggctcccgctccgcaggcaccg
cgtccggagcctcccgtggcacgcccggcccccgagccgccaccgcgcccggcgcccgaa
cccgtggcgccgcccccacctgccgcacccgtacctgccgcagcgcctgcggcgccggcc
ccggcagcggaaaccggttctgtgccagggcaacccaacgccgccgcggtgcgcagcatg
tggtcgaccgtgcgcgagaaggtccgccagcgcagccgcaccaccgaggtgatgctgtcc
ggtgcgatcgtgcgcgcggtcgaaggtgacacgctggtgctcagccacgagtcggcgccc
ctggccaaacgtctcaccgaatcgcgcaactccgaggtgatccgcgaggccctcaaggat
gcgctgggtgtcaactggaaggtccgctgcgtcacgggtgcacccgaagcggcagtggcg
gccccacccgcggcgaccggtggcgcggccccgcaggcgcccgccccggatccggtcgag
atcgcgcgtgccgaggaggacgacatgctggccgaggcggccgccgagccgtcggagtcg
atgccgcgccgcgaccccgaagaggtggcgctcgaactgctgcagaacgaactcggggcc
cggcgcatcgacgggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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