KEGG   Mycoplasma suis KI3806: MSUIS_04210
Entry
MSUIS_04210       CDS       T01442                                 
Name
(GenBank) Metallo-beta-lactamase superfamily protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
msk  Mycoplasma suis KI3806
Pathway
msk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSUIS_04210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msk03019]
    MSUIS_04210
Messenger RNA biogenesis [BR:msk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MSUIS_04210
SSDB
Motif
Pfam: Lactamase_B Lactamase_B_2 RMMBL RNase_J_C
Other DBs
NCBI-ProteinID: CBZ40514
UniProt: F0V1I3
Position
359794..361644
AA seq 616 aa
MVFHTVEQHIFECRKNKQKDPTFFYSIGGIEEIGKNCYCVEHLDEIVIMDFGIKFGNKLT
QPGVTGEIPNLDYLIENQKKIFGLLITHGHEDHIGGVPHLVNSLDIPVIYAPALAMELIK
KKLEENKIERLPKLEVYDPDTIIFTKHFAFDVFPVNHSIPDSFGFAISTPNGVVVFSGDF
RFDLKNKIDSKAFQRLISIGGRQVDLLLCESTAAAQPGFNESEATIIQELKNIISSSEGR
IIITFFASNLGRIEEIVKLASSAGRKIIVFGRSIESSLKCSQAVGILNSNELKNVFIPSS
EINTVPDKKILIICTGSQGEESSALNNISKGLHPIIQLKPSDDIIFSSNVIPGNKQAVNE
LVNRLYKSGCRLFLNSNECKIHASGHATKLEQQLFISLIAPSFLAPVHGEKKMLHDLKRN
ISELKIVPSENIFILKNGEKLKIFNRKVTKAEPEEHLQFKFPYYVMENKLTDHGRETLGA
RTKLATNGLLTVSMTVDLSTKKLFSISPVTTIGSLSFSLSAEILRDLGRMISKNTEELFN
NSKGGLSKEDIISSNSKIITDFFNKKGHKIPQILILLEETNSNELWENSISANTYSKPAP
AGTQSSEQQSNSSTTN
NT seq 1851 nt   +upstreamnt  +downstreamnt
atggtttttcacacagtagaacaacacatattcgaatgtagaaaaaataagcaaaaggat
cctactttcttctattccattggaggaatagaagaaataggtaagaactgctactgtgta
gaacaccttgatgaaatagtcattatggactttggaatcaagttcggtaataagttaact
caaccaggtgttactggcgaaattccaaacttggattacttaattgaaaatcaaaagaaa
atatttggtcttttgataactcacggacacgaagaccacattgggggagttccacaccta
gtgaattctctagacatacctgttatatatgctccagctttagctatggaacttataaaa
aagaaactagaagaaaacaagattgaaagacttccgaaattggaagtctatgatccagac
acaataatattcacaaaacattttgcttttgatgttttcccagttaatcactcaattcca
gactcatttggatttgctatttcgactccaaatggagttgtagtatttagcggggacttc
agatttgacttaaagaacaagatagatagtaaagctttccaaagacttataagtattgga
ggaagacaagttgatcttcttctgtgtgaatccacagcagcagctcaacctggattcaat
gaaagcgaagcaactatcattcaagagctaaaaaatattatttcttcctccgagggaaga
ataataattactttctttgcttccaacttaggaagaatagaggaaatagttaagttagct
agttcggctggaagaaaaataatagtgtttggtagatctattgaaagtagcttaaaatgc
tctcaagcagttggaattcttaattccaatgaacttaaaaatgtatttattccttcttca
gaaataaatacagtaccagataaaaagatacttattatctgtactggttcccagggagaa
gaatcctcagcccttaataatatttctaagggtctacacccaataattcaactaaagcct
tcagatgatattattttctcttcaaatgtaattccagggaataaacaagcagttaatgaa
ttagtaaatagactttacaagtctggttgcagactattcttgaactcaaatgagtgcaag
attcacgcttctggtcacgcaactaaacttgaacaacaattatttatttccttaattgcg
ccttcattcttagctccagttcacggagaaaagaaaatgttacatgatcttaagagaaat
atctcagaactaaaaatagttccgagtgaaaatatttttattctgaagaatggagaaaaa
ttaaagatatttaatagaaaagtgactaaagctgaacctgaagaacatcttcaatttaag
ttcccttactatgtaatggaaaataaattgactgaccatggtagagaaacattgggggct
agaactaagttagcaaccaatgggttgttaactgtttctatgacagtagatctatcaact
aaaaaattattctctatttctccagtaacaactattggttctctctcattctccctatca
gctgaaattcttagagatttagggagaatgatttctaagaatacagaggaattatttaat
aacagtaaaggaggattatcaaaagaagatattatttcctctaactcaaagataattact
gatttcttcaataagaaaggacataagattcctcaaatactaatactattagaagaaact
aatagtaatgaattgtgagagaattctataagtgctaacacttacagtaagccagctcct
gcgggaactcaatcttctgagcaacaatccaattcttctactactaactag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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