KEGG   Mycobacterium tuberculosis CCDC5079: CCDC5079_2526
Entry
CCDC5079_2526     CDS       T01991                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mte  Mycobacterium tuberculosis CCDC5079
Pathway
mte03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mte00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CCDC5079_2526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mte03019]
    CCDC5079_2526
Messenger RNA biogenesis [BR:mte03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CCDC5079_2526
SSDB
Motif
Pfam: RNase_J_C Lactamase_B_2 RMMBL Lactamase_B
Other DBs
NCBI-ProteinID: AEJ47716
Position
complement(3045210..3046841)
AA seq 543 aa
MRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRLDDIE
ALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITPVFVEVREGQSTR
HGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDGRPTDLPGMSRLGDTG
VDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFASNVDRVQQIIDAAVAL
GRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQVVLITTGTQGEPMSAL
SRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGARVVTNAQARVHVSGH
AYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESILLAENGVSVDLVAGK
ASISGAVPVGKMFVDGLIAGDVGDITLGERLILSSGFVAVTVVVRRGTGQPLAAPHLHSR
GFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKWVGETYRRQPMIVPTV
IEV
NT seq 1632 nt   +upstreamnt  +downstreamnt
ttgcgggtcaccgcgctgggcggcatcaacgaaatcggccgcaacatgacggttttcgaa
cacctgggccgactgttgattatcgactgcggtgtgttgtttcctggccacgacgagccc
ggtgtcgatctgatcctgccggacatgcgccatgtcgaagaccggcttgacgacatcgag
gcgctggtgttgacccacgggcacgaggaccacatcggggcgattccgtttctgctcaag
ctgcgacccgacatcccggtcgtcggctcgaagttcaccttggctctggttgcagagaaa
tgtcgtgagtaccgcataacaccggtgttcgtcgaggtccgcgagggccagagcacccgg
cacggcgtgtttgagtgcgagtacttcgccgtcaaccattccactccggacgcgttggcc
atcgcggtgtataccggcgcgggaaccatcctgcacaccggcgacatcaagttcgaccaa
ttgccaccggacggccgtcccaccgatctaccgggcatgtcgcggctcggcgacaccggc
gtggacctgttgctgtgcgactcgacgaacgccgagatccccggtgtcgggccatcggaa
agcgaagtgggcccaacgctgcaccggctcatccggggtgccgacggacgggtgatagtt
gcgtgtttcgcctccaacgtggatcgggtacagcagatcatcgatgccgcagtggcattg
ggccggcgagtgtcgttcgtcggccgatcgatggtgcgcaacatgcgcgtcgcaaggcaa
ctgggcttcctacgagtggctgattccgatctcatcgacatcgccgccgccgaaacgatg
gcgcccgaccaagttgtgttgatcaccaccggcacccaaggcgagccgatgtcggcgttg
tcgcgaatgtcgcgtggggagcatcgcagcatcacgttgactgctggtgatctcatcgtg
ttgtcgtcgtcgctgatccccggcaacgaggaggcggtcttcggagtcatcgatgcactg
tccaagatcggcgccagagtcgtcaccaacgcccaagcaagggtgcatgtttccggccac
gcgtacgccggtgagctgctgttcctctacaacggggtgcggccgcgcaacgtgatgccg
gtgcacggaacctggcggatgctgcgcgccaatgccaagctggccgccagtaccggcgta
ccgcaagagtcaattctgttggccgagaacggtgtcagcgtcgacctggttgccggcaaa
gccagtatctccggtgcggtgccggtgggcaagatgttcgtcgacggcttgatcgccggc
gacgtcggcgatatcaccctgggcgagcggctcattttgtcgtcgggctttgtcgcggtg
accgtcgtggtcagacgtggcaccggccagccgttggctgcgccacatctacactcgcgg
ggtttctccgaagatcccaaggcgctcgaacccgccgtgcgcaaggtggaggcagagctg
gaatcgttggtggccgccaacgtcaccgatccgatccggatcgctcaaggggtgcgccgc
acggtcggcaagtgggtgggggaaacctatcgccgccagccgatgattgtgccgacggtc
atcgaggtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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