KEGG   Microbulbifer thermotolerans: A3224_05205
Entry
A3224_05205       CDS       T04393                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
mthd  Microbulbifer thermotolerans
Pathway
mthd00300  Lysine biosynthesis
mthd00550  Peptidoglycan biosynthesis
mthd01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:mthd00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    A3224_05205
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A3224_05205
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mthd01011]
    A3224_05205
Enzymes [BR:mthd01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     A3224_05205
Peptidoglycan biosynthesis and degradation proteins [BR:mthd01011]
 Precursor biosynthesis
  Amino acid ligase
   A3224_05205
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase RraA-like
Other DBs
NCBI-ProteinID: AMX02058
UniProt: A0A143HK21
Position
1239690..1241204
AA seq 504 aa
MSQREKRAVSLKVLVPGYAGIPEVPVSGVALDSRLVQPGDVFMALRGTVVDGREYIAEAI
AAGAAAVLADGDTLETKVCDGIQIVSVPGLAKRVGEIAARFHGNPTGQMHLVGVTGTNGK
TTCAYLTSQLLARHFGSAALMGTIGNGIWTDGDIELQETGLTTPDPVRLQADYARFRDYG
VRAAAMEVSSHALSQGRVHGLIFDTAIFTNLSRDHLDYHGNMADYGAAKEKLFGLPKLKR
GIINLDDPFGAQLAERCKLRNLNVITYGLQAGDLHVTDLCRHEGGFSVQLATPWGSGELK
APLIGDFNIHNALAVVAAAASAGMPFEAILATFPEIQPVPGRMERVKVDGTEDISVLVDY
AHTPDALRAALAAARPYCRGNLWCVFGCGGDRDSGKRAPMGRIASEMADRTIVTSDNPRG
EEPQKIIDDILEGAASNVEVEADRARAIQRAVTCAQPGDIILIAGKGHEDYQIIGSEKIH
FCDREQAAAALQQRLAETVRGAGL
NT seq 1515 nt   +upstreamnt  +downstreamnt
gtgagtcagcgcgaaaaaagagccgtgtcgctaaaagtgctggtgccgggttacgccggc
attccagaagtccccgtaagtggcgtggcactggacagccgtttggtgcagccgggtgat
gttttcatggccctgcgcggcacagtcgtggacgggcgcgagtatatcgctgaggctatc
gctgctggagccgcagcggtgctggcagacggcgacaccctggagacaaaggtgtgcgat
ggcattcagatcgtcagtgttccggggctggccaagcgggtgggtgaaatcgccgcacgc
ttccacggcaatccaactgggcaaatgcacttggtgggagtgacgggcacaaatggcaaa
accacctgtgcgtacctgacttcccagctgttggcgcgtcatttcggtagtgccgcgctg
atgggcactatcggcaacggcatctggactgacggtgatatcgagttacaggaaacgggg
ctgacaacaccggatcccgtgcgcctgcaggcggattacgcgcgattccgcgactacggc
gtgcgcgcagcggcaatggaggtgtcttctcacgccctgtcccagggccgggtgcacggc
ttgattttcgataccgcgattttcaccaacttgtcgcgggaccacttggattaccacggc
aatatggctgactacggagcggccaaggaaaaattgttcgggctgcccaaactcaagcgc
ggcatcattaatttggatgatccttttggtgcacaactggcagagcgttgcaagctgcgc
aatttgaatgtcattacctatgggctgcaggccggtgatctgcatgtgaccgacttgtgt
cggcacgaaggcggcttttccgtacaactggctacgccttggggtagtggcgaattgaaa
gcgccgctaattggtgacttcaacatccacaacgcattggcagtggttgccgcggcggca
tccgcggggatgccttttgaagccattctcgccacgttccctgagatacagccggtgccc
ggtcgcatggagcgcgtgaaggtggacgggactgaggatatcagtgtgctggtggattac
gcccatacgccggacgcactgcgcgcggccctggcagcggcgcggccatattgccgcggt
aacctctggtgcgtattcggttgcgggggcgaccgcgattctggcaagcgcgcacccatg
gggcgtatcgcctctgaaatggcggaccgcaccattgtgaccagcgacaatccgcgtggc
gaggaaccgcaaaaaattatcgacgatattctcgaaggtgcagccagtaatgttgaagtg
gaagccgatcgcgctcgggcaatccagcgcgcggtaacttgtgctcagccgggagacatt
attctcattgccggtaagggccacgaggattaccagattatcggcagtgaaaaaattcat
ttctgcgatcgcgagcaggccgcggcggcattgcagcaacgcctcgcggaaacagtgcgg
ggagcaggcttatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (51)   

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