KEGG T02653: J114

Mycobacterium tuberculosis EAI5/NITR206: J114_00025

Entry

J114_00025        CDS       T02653

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

mtue Mycobacterium tuberculosis EAI5/NITR206

Brite

KEGG Orthology (KO) [BR:mtue00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mtue03032]
    J114_00025 (gyrB)
   03400 DNA repair and recombination proteins [BR:mtue03400]
    J114_00025 (gyrB)
Enzymes [BR:mtue01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     J114_00025 (gyrB)
DNA replication proteins [BR:mtue03032]
Prokaryotic type
  DNA Topoisomerases
   J114_00025 (gyrB)
DNA repair and recombination proteins [BR:mtue03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      J114_00025 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c

Other DBs

NCBI-ProteinID:

AGL29422

Position

5233..7260

AA seq 675 aa
MAAQKKKAQDEYGAASITILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNAVDEAMAG
YATTVNVVLLEDGGVEVADDGRGIPVATHASGIPTVDVVMTQLHAGGKFDSDAYAISGGL
HGVGVSVVNALSTRLEVEIKRDGYEWSQVYEKSEPLGLKQGAPTKKTGSTVRFWADPAVF
ETTEYDFETVARRLQEMAFLNKGLTINLTDERVTQDEVVDEVVSDVAEAPKSASERAAES
TAPHKVKSRTFHYPGGLVDFVKHINRTKNAIHSSIVDFSGKGTGHEVEIAIQWNAGYSES
VHTFANTINTHEGGTHEEGFRSALTSVVNKYAKDRKLLKDKDPNLTGDDIREGLAAVISV
KVSEPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPTDAKVVVNKAVSSAQARIAA
RKARELVRRKSATDIGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSGRDSMFQAILP
LRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDIGKLRYHKIVLMADADVDGQHI
STLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRSDPEFAYSDRERDGLLEAGLKAGKK
INKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSILMGEDVDARR
SFITRNAKDVRFLDV

NT seq 2028 nt +upstreamnt +downstreamnt
gtggctgcccagaaaaagaaggcccaagacgaatacggcgctgcgtctatcaccattctc
gaagggctggaggccgtccgcaaacgtcccggcatgtacattggctcgaccggtgagcgc
ggtttacaccatctcatttgggaggtggtcgacaacgcggtcgacgaggcgatggccggt
tatgcaaccacagtgaacgtagtgctgcttgaggatggcggtgtcgaggtcgccgacgac
ggccgcggcattccggtcgccacccacgcctccggcataccgaccgtcgacgtggtgatg
acacaactacatgccggcggcaagttcgactcggacgcgtatgcgatatctggtggtctg
cacggcgtcggcgtgtcggtggttaacgcgctatccacccggctcgaagtcgagatcaag
cgcgacgggtacgagtggtctcaggtttatgagaagtcggaacccctgggcctcaagcaa
ggggcgccgaccaagaagacggggtcaacggtgcggttctgggccgaccccgctgttttc
gaaaccacggaatacgacttcgaaaccgtcgcccgccggctgcaagagatggcgttcctc
aacaaggggctgaccatcaacctgaccgacgagagggtgacccaagacgaggtcgtcgac
gaagtggtcagcgacgtcgccgaggcgccgaagtcggcaagtgaacgcgcagccgaatcc
actgcaccgcacaaagttaagagccgcacctttcactatccgggtggcctggtggacttc
gtgaaacacatcaaccgcaccaagaacgcgattcatagcagcatcgtggacttttccggc
aagggcaccgggcacgaggtggagatcgcgatccaatggaacgctgggtattcggagtcg
gtgcacaccttcgccaacaccatcaacacccacgagggcggcacccacgaagagggcttc
cgcagcgcgctgacgtcggtggtgaacaagtacgccaaggaccgcaagctactgaaggac
aaggaccccaacctcaccggtgacgatatccgggaaggcctggccgctgtgatctcggtg
aaggtcagcgaaccgcagttcgagggccagaccaagaccaagttgggcaacaccgaggtc
aaatcgtttgtgcagaaggtctgtaacgaacagctgacccactggtttgaagccaacccc
accgacgcgaaagtcgttgtgaacaaggctgtgtcctcggcgcaagcccgtatcgcggca
cgtaaggcacgagagttggtgcggcgtaagagcgccaccgacatcggtggattgcccggc
aagctggccgattgccgttccacggatccgcgcaagtccgaactgtatgtcgtagaaggt
gactcggccggcggttctgcaaaaagcggtcgcgattcgatgttccaggcgatacttccg
ctgcgcggcaagatcatcaatgtggagaaagcgcgcatcgaccgggtgctaaagaacacc
gaagttcaggcgatcatcacggcgctgggcaccgggatccacgacgagttcgatatcggc
aagctgcgctaccacaagatcgtgctgatggccgacgccgatgttgacggccaacatatt
tccacgctgttgttgacgttgttgttccggttcatgcggccgctcatcgagaacgggcat
gtgtttttggcacaaccgccgctgtacaaactcaagtggcagcgcagtgacccggaattc
gcatactccgaccgcgagcgcgacggtctgctggaggcggggctgaaggccgggaagaag
atcaacaaggaagacggcattcagcggtacaagggtctaggtgaaatggacgctaaggag
ttgtgggagaccaccatggatccctcggttcgtgtgttgcgtcaagtgacgctggacgac
gccgccgccgccgacgagttgttctccatcctgatgggcgaggacgtcgacgcgcggcgc
agctttatcacccgcaacgccaaggatgttcggttcctggatgtctaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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