KEGG   Mycobacterium tuberculosis CCDC5079: CFBS_3488
Entry
CFBS_3488         CDS       T02679                                 
Symbol
nei
Name
(GenBank) endonuclease VIII
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
mtur  Mycobacterium tuberculosis CCDC5079
Pathway
mtur03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mtur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CFBS_3488 (nei)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtur03400]
    CFBS_3488 (nei)
Enzymes [BR:mtur01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CFBS_3488 (nei)
DNA repair and recombination proteins [BR:mtur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CFBS_3488 (nei)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH Nudix_N_2 zf-FPG_IleRS RNHCP
Other DBs
NCBI-ProteinID: AGM01921
Position
3673970..3674737
AA seq 255 aa
MPEGDTVWHTAATLRRHLAGRTLTRCDIRVPRFAAVDLTGEVVDEVISRGKHLFIRTGTA
SIHSHLQMDGSWRVGNRPVRVDHRARIILEANQQEQAIRVVGVDLGLLEVIDRHNDGAVV
AHLGPDLLADDWDPQRAAANLIVAPDRPIAEALLDQRVLAGIGNVYCNELCFVSGVLPTA
PVSAVADPRRLVTRARDMLWVNRFRWNRCTTGDTRAGRRLWVYGRAGQGCRRCGTLIAYD
TTDERVRYWCPACQR
NT seq 768 nt   +upstreamnt  +downstreamnt
atgcccgagggcgacaccgtctggcacaccgcggccacgttgcggcggcatctggccggt
cgcacgttgacacgttgcgacatccgagtgccacggtttgccgccgtcgacctcaccggc
gaggtagtggacgaggtgatcagtcggggcaagcacctgttcatccgaaccgggacagcc
agcattcattcgcatctgcagatggacggcagctggcgggtcggcaaccggccggtgcgg
gtggatcatcgggcgcgaatcattttggaagccaaccagcaagaacaggccatccgggtg
gtcggcgtcgacctaggcctgttggaggtcatcgaccggcacaacgacggcgccgtcgtc
gcacacctaggacctgatctgctggccgacgattgggacccgcagcgtgcagccgccaac
ctgatcgttgccccggaccggcccatcgccgaggcactgctcgaccagcgggtgctcgcc
gggatcggcaacgtgtattgcaacgaactgtgcttcgtcagcggagtattgccgacggcc
ccggtgagcgcggtcgccgacccgcgccgcctggtcacccgcgcccgagacatgctgtgg
gtcaaccgcttccgctggaatcggtgcaccactggcgatacccgggccggccggcgactg
tgggtctacgggcgggccgggcagggttgccgccgctgcggcacgctcatcgcctacgac
actaccgacgagcgggtgcggtattggtgcccggcctgccagcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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