KEGG   Methylosinus trichosporium: CQW49_18445
Entry
CQW49_18445       CDS       T05155                                 
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
mtw  Methylosinus trichosporium
Pathway
mtw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mtw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CQW49_18445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtw03400]
    CQW49_18445
Enzymes [BR:mtw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CQW49_18445
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CQW49_18445
DNA repair and recombination proteins [BR:mtw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CQW49_18445
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: ATQ70480
UniProt: A0A2D2D632
Position
3914561..3915433
AA seq 290 aa
MPELPEVETVRRGLEPVFTRSPIERVELRRADLRFPFPPGFAARLAGRRVLALGRRAKYL
IGEIDGGDALIMHLGMSGSFRIDAADPEGVFHRARDTKAAHDHVVLHFSGGARVTYNDPR
RFGFMLLVPRVELAAHPLFVGLGVEPLGPELTPETLAAELAGRKAPLKAALLDQRTIAGL
GNIYVCEALHRAHLSPLRAAGGLVDAKGRPKRGLVDLVRAIREVLGEAIEAGGSSLRDHR
QTDGSLGYFQHSFRVYDREDAPCPTPGCRGQVSRIAQSGRSTFFCRDCQK
NT seq 873 nt   +upstreamnt  +downstreamnt
atgcccgagctgcccgaggtcgagacggtccggcgcggtctcgagcccgtcttcaccaga
tcgccgatcgagcgggtcgagctgaggcgcgccgatctgcgctttcccttcccgcccggc
tttgccgcgcggctcgcgggccggcgcgtgctcgcgctcggccgacgggccaaatatctc
atcggcgagatcgacggcggcgacgcgctcatcatgcatctcggcatgagcggctccttc
cgcatcgacgccgcggacccggaaggcgtttttcaccgcgcccgcgacacgaaggcggcg
catgatcacgtcgtgctgcatttttccggcggggcgcgcgtcacttacaacgatccgcgc
cgcttcggcttcatgctcttggttccgcgcgtcgagctcgcggcgcatcctctgttcgtc
ggcctcggcgtcgagccgctggggccggagctgacgcccgaaactcttgccgcggagctc
gccggccgcaaggcgccgctgaaagcggccctgctcgaccagcgcaccatcgccggcctc
ggcaatatctatgtctgcgaggcgctgcaccgcgcgcatctctcgccgctgcgcgcggcg
ggcgggctcgtcgacgccaagggccggccgaagcgcggcctcgtcgatctcgtccgcgcc
attcgcgaggtgctgggcgaggcgatcgaggcgggcggatcgagcctgcgcgaccatcgg
cagaccgacggctcgctgggctatttccagcattccttccgagtctacgatcgcgaggac
gcgccctgtccgacgcccggctgccggggccaggtctcgcggatcgcccagagcgggcga
tccaccttcttctgccgcgactgccagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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