KEGG   Mucilaginibacter xinganensis: MuYL_3815
Entry
MuYL_3815         CDS       T05010                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
muc  Mucilaginibacter xinganensis
Pathway
muc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:muc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MuYL_3815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:muc03019]
    MuYL_3815
Enzymes [BR:muc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MuYL_3815
Messenger RNA biogenesis [BR:muc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     MuYL_3815
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_19 SNF2-rel_dom UvrD-helicase ERCC3_RAD25_C CobA_CobO_BtuR P-loop_SecA
Other DBs
NCBI-ProteinID: ASU35700
UniProt: A0A223P102
Position
4049486..4050802
AA seq 438 aa
MLFQDLKLIEPILRALKTEGYTTPTPIQEQAIPIVLQNRDLLGCAQTGTGKTAAFAIPIL
QLLYQDRLQHKEQKTIKALILTPTRELAIQINESFAAYGKHTGLKHLVIFGGVNQNPQTE
ALRRGVDILVATPGRLLDLMNQKYVHLDHIKMLVLDEADRMLDMGFVHDVKKIIAKVPAK
RQTLFFSATMPKEIQQLADTILNKPEKVEVTPVSSTADTIQQALYYVEKNDKRALLAHIL
KDKEIKTALVFTRTKHGADKVVKDLVRIGITAEAIHGNKSQNARQRALTNFKNRTTRVLI
ATDIAARGIDIDELTHVINYEIPNIPETYVHRIGRTGRAGASGIALTFCDQEEIEFLKDI
HKLIAKEIPVEEGHPYPMSPQSIVAKHAEGQKKGGGGGQQRGRSFGRADRGRGASGKTSG
GSGMSGASRGGNRSARRD
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgttatttcaagatttaaaattaattgagccgattttacgggctctaaaaaccgagggt
tatacaacccccacccccatacaggaacaagccatacctattgtattacaaaaccgcgac
ctgctgggttgcgcacaaaccggtaccggcaaaacagctgcctttgctattcctatttta
cagttattataccaggacaggctgcagcacaaagaacaaaaaacaataaaggcccttata
ttaaccccaacccgcgagctggctatccagattaacgaaagctttgccgcgtacggcaaa
cacaccggcttaaaacacctggtaatatttggcggtgttaatcaaaacccgcaaaccgaa
gccttaagaagaggcgttgatattttagtagctacccccggccgtttgctggacctgatg
aaccagaagtatgttcacctggaccatattaaaatgctggtactggatgaagccgaccgc
atgcttgacatgggttttgtacatgatgttaaaaagattattgctaaagtgcctgccaaa
aggcaaacgttattcttttcggccaccatgccaaaagaaatccagcagcttgcagatacc
atactgaataagcctgaaaaagttgaagttaccccggtttcatcaactgcagataccata
cagcaggcgctttactatgttgaaaagaacgacaaaagagcgttgcttgctcatatattg
aaagataaagagataaaaaccgcactggtatttacccgcaccaaacacggagccgataag
gtggtgaaagacctggtacgcataggcattactgccgaggctattcacggtaacaaatca
cagaatgcccggcagcgtgcattaacaaactttaaaaatcgcactacccgggtgttaatt
gcaacggatattgcagcgcggggtattgatattgacgagcttacgcacgttattaattac
gagatcccaaacattcctgaaacgtatgttcaccgtattggccgtaccggccgtgccgga
gccagtggcatagcattaacgttttgcgaccaggaagaaattgaattcttaaaagatatc
cacaagctgattgcaaaagagatcccggttgaggaaggacacccctaccctatgagcccg
caaagcatagttgcaaaacatgctgaaggccaaaagaaaggcggcggtggcggccagcaa
cgcgggcgcagtttcggcagggccgatcgtggtcgtggtgcaagcggtaaaacctcgggc
ggcagcggcatgagtggtgcaagccgcggcggcaatcggagcgcacgaagagattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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