KEGG   Musa acuminata (wild Malaysian banana): 103981237
Entry
103981237         CDS       T03447                                 
Name
(RefSeq) WD repeat-containing protein RUP2-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus04120  Ubiquitin mediated proteolysis
mus04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103981237
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    103981237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mus04121]
    103981237
Enzymes [BR:mus01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103981237
Ubiquitin system [BR:mus04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103981237
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     103981237
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 103981237
NCBI-ProteinID: XP_009396164
UniProt: A0A804INS1
Position
4:complement(8720165..8722003)
AA seq 412 aa
MRPEISHYHSLIGPRPLRLLHRSFKHHPQSPFLYERAMSTSPHHEPAQQQRGGSVVAALE
EEKEEKARCEWDFWLSTVVSPSTAAGEVSDAIGAIEFDPTDRLLATGGIARKIRIYSLGT
LLPESRDSSLTFSDHSTACLLCICTPAKLSSLRWRPDSSGRTVGSGDYDGVVTEYDVERN
VAVFERDEHAGRRVWSVDYSVSGDLGASGSDDGTVQLWDSRCANGGRVAAARAGGAVCSV
EFDPEGGPWVGAGSADRHAYVFDVRAVSAGPVTALGGHGRAVTYVRFAQSGRSVVTSGTD
GSHRLWEWADGREVRAYRGHVNSRSFVGMSVWRGAGLVGSGSESNEVFVYDLRWQEPIWV
RGFGPRREEGGAFVGAVSWRQAVSGPGEGALVAGGSDGVLQVFVGRKKTESE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgagacctgagatctcccattatcatagtcttatcggccctcgaccccttcgactgttg
caccgatctttcaagcaccatccacagtccccgttcctctatgaacgggcaatgagcact
tctccccatcatgagccagcacagcagcaacgaggaggaagcgttgtggcagcacttgaa
gaggagaaggaagagaaggctcgctgtgaatgggacttctggctctcaaccgtggtctcc
ccgtctacggctgccggagaggtttctgacgccatcggcgccatcgagttcgaccccacc
gaccgcctcttggccaccggcggcatcgccaggaagatacgaatatacagcctcggcact
ttgcttccggaaagccgcgactcgagcctgaccttctccgatcactcgactgcttgtctg
ttgtgtatttgcacgccggcgaagctcagcagcctgcggtggcggcctgactctagtggc
cgcaccgttggctcgggtgactacgacggcgtcgtcacggagtacgacgtggagcgcaac
gtggccgtcttcgagcgcgacgagcatgccgggcgccgcgtctggagcgtggactactcc
gtcagcggggacctcggcgcgtcggggtccgacgacggcacggtgcagctatgggactcg
aggtgcgcgaacggcgggcgcgtggcggccgcgcgcgccgggggggcggtctgcagcgtg
gagttcgaccccgagggggggccgtgggtgggggcggggagcgccgaccggcacgcgtac
gtgttcgacgtgcgggcggtctcggcggggccagtgacggcgctcggcgggcacgggcgg
gcggtgacgtacgtccgcttcgcgcagagcgggcggagtgtggtgacgtcggggacggac
gggtctcaccggctgtgggagtgggcggatgggagggaggtccgggcgtaccgcggccac
gtgaactcacgcagcttcgtcggcatgtctgtgtggcgaggggcggggctcgtcggcagc
gggtcggagagcaacgaggtgttcgtttacgacctccggtggcaggagccgatatgggtg
cggggattcggtccaaggagggaggaggggggcgcgttcgtcggcgcggtgagttggagg
caggctgtgtcggggcctggagagggcgcgctcgtggccggcggatcggacggggtcttg
caggtcttcgttggcaggaagaagactgagtctgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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