KEGG   Musa acuminata (wild Malaysian banana): 103986954
Entry
103986954         CDS       T03447                                 
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103986954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mus03400]
    103986954
DNA repair and recombination proteins [BR:mus03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     103986954
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII
Other DBs
NCBI-GeneID: 103986954
NCBI-ProteinID: XP_018683673
UniProt: A0A804JD79
Position
6:3118114..3130213
AA seq 1015 aa
MHFQGHKRRKINNEDSNDNCISNLKTPPLNYGKIGGSSKVIDYSNDFALTNLLERLEDGK
YGSVTKEYEALHSQRMQVINFLSALQPSIASRTFQGGGSTSTNLSTRQNQMKSGQHGDNL
SHDIIDLEVDTMEGAANPVRIPVEQTQDAVGNISLHSSDFESVTRKGKLDAARGPLNTPP
VDEDNKEETTVIIVDSDEEDASHQGKTKYDCHPDHEVLEFGASLASQIQKHISRASKLAQ
EVNLYQLVPYDQGIGRSVCTTNFKPNWQPSVHFEKVVLQTVDEKQRFQDVVDEKNMEMRC
ERQAAEAPNVVKTLYSNAEMNKEKECDGNPKFVSSTAIKDISSGMGSLYEVDKVSSQSDG
LEDLWKDMSLAMEYSKIDTSDDQALVQQEEECNHSYLLQDDFGLVCRICGVIQKRIDTIF
DFQWTKGSRATRTYLTGPGNSKDLVAHYSGLEVSEDDFIAAELSIHPRHLKQMKPHQLEG
FNFLVKNLVTDKPGGCILAHAPGSGKTFMLISFIQSFLAKYPLKKPLVILPKGILPTWKK
EFQRWQVEDLPIYDFYSSKADNRSQQLEVLKLWQENKSILFLGYKQFTNIIYDKENSKVS
AACREMLLKIPSLLILDEGHTPRNEDTFVLDSLAKVQTPRKVVLSGTLFQNHVREVFNIL
NLVRPKFLRMETSRVIVKRVLSRIYISGGRKLSKSSVDNAFYDLVEETLQHDENFKRKVT
VIRDLRELTKDVLHYYKGDFLEELPGLVDFTVLLNLSAKQRVYVQKLAKFEKFKRTSMGS
AVYIHPHLYDTAEKASGDRVAFFNDDKIDSLLESLNIRDGVKTKFFLNILSLAESAGEKL
LAFSQYILPLKFLERLIVKTKGWHLGKEIFMISGDSTSEQREWSMEQFNNSPDAKVFFGS
IKACGEGISLVGASRVVILDVHFNPSVTRQAIGRAFRPGQLKKVYIYRLVAADSPEEEFH
YTSFSKEFISKMWFEWSEYCGHQNFELDEVDLASCEDLFLESPIIGEDIKAVYRR
NT seq 3048 nt   +upstreamnt  +downstreamnt
atgcattttcaaggacacaagaggaggaaaattaacaatgaggatagcaacgataattgc
atatcaaatttgaaaactccacctcttaactatggaaagattggaggctcttctaaggtt
attgactactcaaatgattttgctttaaccaatcttctggaaaggttagaagatggtaag
tatgggagtgtaaccaaagaatatgaagctcttcattctcagaggatgcaggtaatcaat
tttttatctgcgttacagccaagtatagcatctagaacttttcagggtggtggaagcact
tctactaatttatcaacaaggcagaatcagatgaagtcaggtcaacatggtgataactta
tctcatgatataatcgatctggaagttgataccatggaaggtgctgctaaccctgtcaga
atacctgtagaacagacacaggatgctgttgggaatatctcactacattccagtgatttt
gagtctgtaacgcggaagggaaagttagatgctgcacgtggcccattgaatacaccccca
gtagatgaagacaacaaagaggaaaccacagtcataattgtagattcagacgaagaagat
gcaagccatcaaggcaaaacaaaatatgattgccaccctgatcatgaggtcttggaattt
ggagcgtcactggcaagtcaaatccagaagcacatatcacgagccagcaagttagcacaa
gaagttaacttgtatcaactagttccatatgaccaaggaattggaagatcagtgtgtact
actaattttaaaccaaactggcagccttctgttcattttgaaaaggtggtcttacagaca
gtcgatgagaagcagcggtttcaagatgttgttgatgaaaagaatatggaaatgagatgt
gagagacaagctgctgaagctcctaatgtagtaaagactctgtattctaatgctgaaatg
aataaagagaaggaatgtgatggcaatccaaaatttgtttcctctacggcaatcaaagat
atctcatcaggcatgggaagcctttatgaagttgacaaagtatcatcacaaagtgatggt
ctggaagatctttggaaagacatgtcattagcaatggaatattcaaagattgatacatca
gatgatcaagcacttgtgcaacaagaagaagaatgtaaccattcgtacttgctccaagat
gactttggccttgtttgtcgtatttgtggagttattcagaagaggatagatacaatattt
gatttccagtggacgaagggctcacgtgcaacaaggacatacttgactggaccagggaac
tccaaggatctagtggctcactactctggccttgaagtttcagaggatgattttattgct
gccgaattatctattcatccaaggcatctgaagcaaatgaagccgcatcagctagaaggc
ttcaatttcttggttaagaacttggttacagataaaccaggaggatgtattttggctcat
gcgccggggtctgggaaaaccttcatgcttataagcttcatccagagtttcttggctaag
tatccattgaagaagcctttggttatccttcctaagggtattttgcctacatggaagaaa
gagttccaacggtggcaggttgaggatttacccatctatgatttctactcctctaaagct
gataacagatctcagcaattggaagtgttaaagctttggcaagagaataaaagcattctt
tttttgggttataaacaatttacgaatatcatttatgataaagaaaacagcaaggtctct
gctgcatgtcgggaaatgctgctgaaaatccccagccttctgatattggatgaaggccac
actccaagaaatgaggacacattcgtgcttgattcacttgcaaaggtgcagactcctcga
aaagtagtactttcaggaaccctatttcagaatcatgttagggaggtcttcaatattttg
aatcttgtgcgccctaagtttttgaggatggagacttcccgagtcattgtcaagcgagtc
ctaagtagaatatatatatcaggaggtagaaaactctctaagagtagtgtggacaacgct
ttctatgatttggttgaggaaacactgcagcatgatgagaatttcaaaagaaaagttact
gttatacgagaccttcgagaattaaccaaggacgttcttcattattataagggtgatttc
ttggaagagctgcctggtctcgtggatttcactgtcctcttgaacctcagtgctaagcaa
agagtgtatgttcaaaaacttgccaagtttgagaagttcaaaagaacctctatgggtagt
gctgtctatatccatcctcacttgtatgacacagcagaaaaggcttctggggacagggtc
gcatttttcaacgatgataagatcgatagcttgttagaatctcttaatatcagagatggg
gttaaaacaaaatttttcctcaacattttgtctctggctgaatctgctggagagaaacta
cttgctttcagtcaatacattctacctctaaaatttttggaaaggctaatagttaaaacc
aagggttggcatttaggaaaagaaatttttatgatatctggtgattcgacttctgagcaa
agagagtggtcgatggagcaatttaacaactcccctgatgctaaggttttctttggttca
atcaaggcttgtggggaaggcatctcacttgtaggtgcatctagagttgtgatcttggat
gttcactttaatccatctgtcacccgccaagctattgggcgtgcatttcggcctggccag
ctgaagaaagtatatatttacaggttagttgcagctgattctccggaggaggaatttcat
tatacctcctttagcaaggagttcatctcaaagatgtggttcgagtggagtgagtattgt
ggccatcagaactttgagttagacgaggttgatttggctagctgtgaagatttgttcttg
gaaagtcctatcataggagaagatatcaaggcggtgtacagaaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system