KEGG   Musa acuminata (wild Malaysian banana): 103988504
Entry
103988504         CDS       T03447                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
mus  Musa acuminata (wild Malaysian banana)
Pathway
mus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103988504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mus03019]
    103988504
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103988504
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     103988504
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 103988504
NCBI-ProteinID: XP_009405313
UniProt: A0A804JIH8
Position
6:13756815..13757887
AA seq 280 aa
MPSLEAEKQPAQVQVRSVWADNLEAEFDNIREAVERYPFAAMDTEFPGVVHRSRKHPAHL
STAERYALLKANVDDLHLIQVGLTLSDAAGNLPDLCDDGGVRYIWEFNFSDFDLYRDRYA
PESIDLLKSNGIDFEKNRARGIDSRHFAELLMSSGLVCNDSAVSWVTFHSAYDFAYLIKI
LTCRRLPEHLGGFMALVRVFFGDKVFDMKHMMKYCHSLYGGLERVASALEIDRAVGRCHQ
AGSDSLLTWQAFRRMKELFFVEDAGEKHAGVLYGLEVADP
NT seq 843 nt   +upstreamnt  +downstreamnt
atgccttcgcttgaagcagagaaacagccggcgcaggtgcaggtccggtctgtgtgggcc
gacaacctggaggcggagttcgacaacatccgtgaggccgtggagcgctaccccttcgcc
gccatggacaccgagttccccggcgtcgttcaccgctcccggaagcaccccgcccacctc
tccaccgccgagcggtacgcgctgctcaaagccaacgtcgacgacctccacctcatccaa
gtcgggctcaccctctccgacgccgccggcaacctccccgacctctgcgacgacggcggc
gtccgctacatctgggagttcaacttcagtgatttcgacctctaccgcgaccgctacgcc
cccgagtccatcgacctcctcaagtccaacgggatcgacttcgagaagaaccgggcgcgg
ggaatcgactcccgccacttcgccgagctcctaatgtcgtcgggactggtgtgcaacgac
tcggccgtgagctgggtgacgttccacagcgcctacgacttcgcatacctgatcaagatc
ctaacttgccgccggctgccggagcatctgggcggattcatggccttggtgagggttttc
ttcggggacaaggtgttcgacatgaagcacatgatgaagtactgccacagcctgtacggc
ggattggagcgggtggcgagcgccctggagatcgaccgggcggtggggcggtgccaccag
gcgggatcggacagtttgctaacctggcaagccttccggcggatgaaggagctcttcttc
gtggaggacgcgggcgagaagcatgccggagtcctctatggattggaagtcgctgaccca
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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