KEGG   Musa acuminata (wild Malaysian banana): 103989692
Entry
103989692         CDS       T03447                                 
Name
(RefSeq) ATP-dependent DNA helicase MER3 homolog isoform X1
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
mus  Musa acuminata (wild Malaysian banana)
Brite
KEGG Orthology (KO) [BR:mus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mus03036]
    103989692
Enzymes [BR:mus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103989692
Chromosome and associated proteins [BR:mus03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    103989692
SSDB
Motif
Pfam: Sec63 DEAD Helicase_C ResIII HHH_5 Cdd1 HHH DNA_pol_lambd_f UTP25 Stealth_CR2
Other DBs
NCBI-GeneID: 103989692
NCBI-ProteinID: XP_009406903
Position
1:complement(9159924..9176823)
AA seq 1107 aa
MGLYRDQHSLIPVADLPQPFRSTFNFRYFNSLQSECFSGCFLSDINMVISAPTASGKTVL
FELCILRLMSKFLSSEGKFNHKKGTLKTIYIAPSKALVQEKLRDWCMKFHSLAIKCLEMT
GDNESYKAKNIQEADIILTTPEKFDAVTRHGARNGDLSFFSDIALVLIDEVHFLNDPRGA
TLEAIISRIKMLSRISEMRSSPLAYVRFLAVSATIPNIQDIAEWLSVPAQGIKRFGEEMR
PVQLMTKVFGYAPAKNDFMFERRLQNFIFDILMQYSRGKSALIFCSTRKGALESAQCLSH
IAMSLGYSNPFIKSIEQQQKLKEASLSFTDKQMQSCIIHGVGYHNGGLCMKDRNLVEGLF
LKGDLQILCTTNTLAHGINLPAHTVVVKSTQYFNREKGLYMEYELSMVLQMCGRAGRPPF
DDAGTVIIMTRRDTVHLYENLLNGCEMVESQLLTCAMEHLTAEIVQLIISDICLAIEWLK
CSYLYVRIKKNPENYGIERGIPHECLEKHMQEICVKKIKELSEHGMIWTDDDGFLLKPLE
PGILMTKFYLKFNTMKLIVNAPGSCSVEDVLRIISHSEELSWIQLRRNEKKLLNDVNSDK
EGRLRFHVLSENGKRKKRIQTREEKIFVLANDCLTGDPLVHDLSLNQDMNSICMSGCRIA
KCIKQCFIYRKNYKGTITSTLLAKCLHHRLWENSPYLLKQLPGIGMVTAKALHSAGINSF
ESLGAADPRKIEIITGRKYPFGNHVKESLLLLPPKVEIKMEEAECKKPGKLKLIVTLNRT
CLSATSTKHHYADMLVGSDEDNMILFHEKIRAEEFPSPYVVTVLVSCPQNARVTLKADLI
FEEYVGLDLHEKLVVTKGNNSIMTRGPLCEDSMPYALPEEIYLIEDDQKSSSKIMCDETL
DLDNLRVNSSMPSFDLLQEETGKGLDALTPEPSETECKTKSIEIIFEHIRKKSKSFPTLL
TSKVMDYTCQPLVLRRDTSKKQGFDVEADLNHIILIDSEPSEVSQELSLPVSFLTETERA
VTTSNLNSVLNPQLPYKLSPTCHQPGCNKPCSDSLETVQTVGCKRSFSNESNPISESPIC
SQGHSVSVHDNLRAESFLGFKSVFSFL
NT seq 3324 nt   +upstreamnt  +downstreamnt
atgggattatatagagatcaacactcgttgattcctgtagctgacttgccacaacccttc
cgttccacatttaatttcaggtacttcaattctttgcagagtgaatgcttttctggctgc
ttcctctcggatataaacatggtcatctcagcaccaactgcaagcggtaaaacagtgctc
ttcgagctctgcattcttaggcttatgtcaaagttcctttcttcagaggggaaattcaat
cataaaaaaggaacacttaagacaatttatatagctccatcaaaggccttggtacaagaa
aaacttcgtgattggtgtatgaagtttcattcactggcaattaagtgcttggagatgaca
ggtgataatgaatcttataaggcaaagaacatacaagaggcagatatcattctaactact
cctgagaagtttgatgctgtcacccgtcatggtgcaaggaatggtgatttgagtttcttc
agtgatattgcgcttgtactcattgatgaagttcactttctcaatgatcctcgtggagct
actttggaagcaataattagtagaataaagatgctttccagaatttctgagatgcgctct
agtcctctagcatatgttcgattccttgcagtttctgcaacaattccaaatattcaagac
atagctgaatggctctcggttccagctcaaggaattaaaagatttggagaagagatgagg
ccagtacaattgatgaccaaagtcttcggctatgccccagcgaaaaatgactttatgttt
gagaggcgccttcagaactttatttttgatatcctcatgcagtattcaagagggaaatca
gcactaatcttctgttctaccagaaaaggagcactagaatcagcacaatgcctttctcat
attgcaatgagtcttggttattcaaatccgttcataaaatccatagaacaacagcagaaa
ctaaaggaagcttctctctcttttactgacaagcaaatgcaatcatgcatcattcatggt
gttggttatcataatggtgggctttgcatgaaggaccgtaaccttgttgagggtctcttc
ctgaaaggcgacctccagatactctgcactacaaacacacttgcacatgggatcaatcta
ccagcacatacagtagtggtcaaatcaacacagtattttaacagagagaagggtctctac
atggaatatgagctatctatggtattgcagatgtgtggcagggctggacggccaccattt
gatgatgcaggaacagttataataatgacaagaagggacacagtgcatttgtatgagaac
ctcctaaatggatgtgaaatggttgagtctcaattgcttacatgtgcaatggagcatctg
acggccgaaatcgttcaactgataatatctgatatatgcttggcgattgagtggctaaaa
tgttcatacctgtatgtcaggataaagaagaatccagaaaactacggcatagagagagga
attcctcatgaatgtctggaaaagcacatgcaagaaatatgtgttaaaaagattaaggag
ttgtcagaacatggaatgatctggacagatgatgatggttttctgctaaaacctttagaa
cctggtatcctgatgacaaaattttacttgaaatttaatactatgaagcttattgtgaac
gctcctggaagttgcagtgtagaagatgtgcttcgtatcatttcacattctgaagagtta
tcttggattcaactgaggcgcaatgagaagaaacttctgaatgacgtaaattctgataaa
gaaggccggcttcgattccatgtgctcagtgaaaatggaaaacgaaaaaagcgtatccag
acaagagaagagaagatatttgtactagcaaatgactgcttgactggtgatcctttggtt
catgatttatcccttaaccaggacatgaactcaatatgcatgagcgggtgtaggattgct
aaatgtattaaacaatgtttcatctatagaaagaattacaagggaaccataacttccact
cttctggcaaaatgcttacaccacagactctgggagaacagtccttacttgctgaaacaa
cttcctggcattggaatggtcactgcaaaggcactacattcagcaggaattaattcattc
gaaagcttgggagcagctgatccaagaaaaatagaaataattactggtcgcaagtatcca
tttggaaaccatgttaaagaatctctgttattacttcctccgaaggtcgaaataaagatg
gaggaggctgaatgcaaaaagccaggaaagttgaaactgatagtaacactgaatcgcaca
tgtctgtcggctacatctactaaacaccattatgcagatatgttggtaggctcagacgaa
gataatatgatactctttcatgaaaagataagagctgaagaatttcccagcccatatgtt
gttactgttcttgtctcatgtcctcagaacgcacgggtgactctgaaagctgatttaatc
tttgaagagtatgttggcctcgatctacatgagaagcttgtagttaccaagggaaacaat
tcaatcatgactagaggaccattgtgtgaagattctatgccttatgcacttccagaggaa
atttatctcatcgaggatgatcagaaaagcagctccaagatcatgtgtgatgaaactcta
gatttagataacttgagggtaaattcatcaatgcccagctttgatctcctgcaggaagaa
actggaaaaggattggatgccttgactccggaaccttcagaaactgaatgtaaaacaaag
tccatagaaattatatttgagcacatccgtaagaagtccaaaagttttccaactctcttg
acatcaaaagtcatggattatacctgccaacctttagttctgaggagagacacatccaag
aaacaaggttttgatgtcgaggcggatctaaaccacataatcctcatagattcagagcct
agtgaagtttcccaggaactgagtctccctgtcagctttctgacagagacagaaagagcc
gtgacaactagtaacctcaatagtgtgctaaatccacagcttccttacaagcttagcccg
acttgtcatcaacctggctgcaacaagccctgcagtgactcgctggaaacagtccaaact
gttggctgcaaaagatcattttccaatgaatcaaatccaatttctgagagcccaatttgt
tctcagggtcattctgtaagtgtacatgacaacctcagggcagaatctttccttgggttt
aagagtgtcttttcatttctttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (10)   
   Pfam (10)   
All databases (46)   

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