KEGG   Mannheimia varigena USDA-ARS-USMARC-1388: X875_12480
Entry
X875_12480        CDS       T03029                                 
Name
(GenBank) tRNA pseudouridine synthase C
  KO
K06175  tRNA pseudouridine65 synthase [EC:5.4.99.26]
Organism
mve  Mannheimia varigena USDA-ARS-USMARC-1388
Brite
KEGG Orthology (KO) [BR:mve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mve03016]
    X875_12480
Enzymes [BR:mve01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.26  tRNA pseudouridine65 synthase
     X875_12480
Transfer RNA biogenesis [BR:mve03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    X875_12480
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AHG79866
Position
1336681..1337412
AA seq 243 aa
MMTLEILYRDDDLIAINKPAGMLVHRSWLDKHETQFAMQTLRDQIGQHVFPIHRLDRPTS
GVLLFALNSEMARLMSEQFEQHLVQKNYLAVVRGYLQGEARIDYPLKVILDKIADKFSQE
KEAQEAVTDYQGLATVEMPYPAGKHATARYSLVELKPQTGRKHQLRRHMKHLFHPIMGDS
KYGDLHQNRALTEKSNVSRLMLHAYKLQFHHPKNLQKIEIIAPLDEQWRQLFTFLDWNFT
QFR
NT seq 732 nt   +upstreamnt  +downstreamnt
atgatgaccttagaaatcttataccgtgatgacgatcttatcgccatcaacaaaccggcc
ggaatgttagttcaccgttcttggctagacaaacacgaaacccaatttgcgatgcagacc
ttgcgggatcaaatcggacagcacgtttttccgattcatcgcttagatcgcccgacttcc
ggcgtattgctttttgcgttaaacagtgaaatggctcgtttgatgagcgagcagtttgag
caacacttggtgcaaaaaaactatttggcggtggtgcgaggctacttgcagggcgaggct
cggattgattacccgctcaaggtgattttagataaaatcgccgataaattttcgcaggaa
aaagaggctcaagaagcagttactgattaccaaggtttagccacggtggaaatgccctat
cctgccggcaaacacgccaccgctcgttatagtttggtggaattaaaaccgcaaaccgga
cggaagcaccagctccgccgccatatgaagcacctgttccacccgattatgggggattcc
aaatatggcgacctgcaccaaaatcgggcgttgacagaaaaatcaaacgtgagccgttta
atgttgcatgcctataagttgcaatttcatcatcccaaaaatttgcaaaaaatagagata
attgcaccgcttgatgaacaatggcgacaactctttacatttcttgactggaactttacc
caatttcgttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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