KEGG   Mannheimia varigena USDA-ARS-USMARC-1388: X875_12580
Entry
X875_12580        CDS       T03029                                 
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
mve  Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve03030  DNA replication
mve03430  Mismatch repair
mve03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    X875_12580
   03430 Mismatch repair
    X875_12580
   03440 Homologous recombination
    X875_12580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mve03032]
    X875_12580
   03400 DNA repair and recombination proteins [BR:mve03400]
    X875_12580
Enzymes [BR:mve01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     X875_12580
DNA replication proteins [BR:mve03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     X875_12580
DNA repair and recombination proteins [BR:mve03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     X875_12580
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C DUF4388 TIG_plexin Blo-t-5
Other DBs
NCBI-ProteinID: AHG79876
Position
1346317..1347339
AA seq 340 aa
MQKIFPETLQLSLNKGLQPFYLLTGNDLLLINESKDLIIQSARSNGFDEKKEIDVKNDTN
WEALFEATQEMGLFFTRQILILNFPESPTATQFKKLAELCALVHSDLLFILHLPKFLKTM
EKQAWFTQIEPQLVQVNCQTPEISKLPQWLSNRTKEMNLQIEFEANQLLCYSYEGNLLAL
KQALQLLQLQCNDGKITLNRAKEVVENSAQFTPFQWIDALFEGKIGRAQRILHHLQNEEV
QAVVLLRIVQKELMILLEITRSPTPILSEQVLFNGNLRTEFDRLKIWQNRRPFYSQVVQR
LTYKKLYTLIQQLAELERKVKQEFSDDIWQELERFSAQFT
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcttcccagaaacacttcaattatctttaaacaaaggattacaacccttt
tatttattaacagggaatgatttactcttgattaatgaatccaaagacttgattattcaa
tctgctcgctcaaacggatttgatgaaaaaaaagagattgacgtaaaaaatgacacaaac
tgggaagctctttttgaagcaactcaagagatggggctattttttacacgccaaattctt
attctcaattttcctgaatcaccaacagctacgcagtttaaaaagctcgccgaactctgt
gctttagtgcattccgatctgctctttattctccatttaccaaaatttttaaaaacaatg
gaaaagcaggcttggtttactcaaattgagcctcaattagtgcaagttaattgccaaaca
cctgaaattagtaaactaccgcaatggttaagcaatagaacaaaagagatgaatttacaa
attgagtttgaggcaaaccaactgctctgctatagctatgagggaaatctacttgcccta
aaacaagccctacagctattacaacttcaatgtaacgatggcaaaattacacttaaccga
gcaaaagaagtagtagaaaattctgctcaatttactccattccaatggattgatgctctg
tttgaggggaaaatcggacgagctcaacgtattttacatcacttacaaaatgaagaagtg
caagcagttgttttattgcgtattgtgcaaaaagagctaatgattttgcttgaaattacc
cgctctccaacgccgatattaagcgaacaagttctctttaatggtaatttacgaacagaa
tttgaccgcttgaagatctggcaaaaccgcagaccgttctatagccaagtagtacaacgt
ttaacttataaaaaactttacaccctaatccaacaacttgctgaattagagcgtaaagta
aaacaagaatttagcgatgatatttggcaagaattagagcgtttttccgctcaatttacc
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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