KEGG   Mannheimia varigena USDA-ARS-USMARC-1312: X874_5320
Entry
X874_5320         CDS       T03028                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
mvg  Mannheimia varigena USDA-ARS-USMARC-1312
Pathway
mvg03030  DNA replication
mvg03430  Mismatch repair
mvg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    X874_5320
   03430 Mismatch repair
    X874_5320
   03440 Homologous recombination
    X874_5320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mvg03032]
    X874_5320
   03400 DNA repair and recombination proteins [BR:mvg03400]
    X874_5320
Enzymes [BR:mvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     X874_5320
DNA replication proteins [BR:mvg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     X874_5320
DNA repair and recombination proteins [BR:mvg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     X874_5320
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 ADK_lid
Other DBs
NCBI-ProteinID: AHG77168
Position
complement(567342..568118)
AA seq 258 aa
MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRRLTGRTYHVYIKPPRNV
DEEAIAVHGITNEFLQDKPVFADIADEFLDFIKGAELIIHNAPFDVAFMDQEFSYLPNPP
AKTSEMCTVTDSLQMARKMYPGKRNNLDALCDRLGIDNSKRVLHGALLDAEILADVFLMM
TGGQISLLGEEEVETTSAVVDSEEEFSAITLNADDAIILKANTEEEESHLALLKLIEKKS
KGNCLWTKAMTEESEILN
NT seq 777 nt   +upstreamnt  +downstreamnt
atgacagaagaaaaaattattcgccaagtggttctggatactgaaaccacaggaatgaat
atggcaggtggaccgccacaaattgggcataatattatcgaaatcggagcggttgaagtg
attaaccgccgtttgactgggagaacttatcacgtttatatcaagccacctcgtaacgtg
gatgaagaagcgattgcggttcacggtattactaatgaatttttgcaggacaagcctgtt
tttgccgatattgctgatgaatttttagacttcatcaaaggggctgaattaattatccat
aatgcccccttcgacgtagcatttatggatcaggaattttcttatctgcctaatcctcca
gcgaaaacatctgaaatgtgtacagttaccgatagcttacaaatggcacgtaagatgtat
ccgggtaagcgaaataatttagatgctttgtgtgatcgtttaggcattgataacagcaag
cgtgtacttcacggagctttactggatgctgagattctcgccgatgttttcttgatgatg
accggcgggcaaatttcattattaggcgaagaagaagtagaaacgacatcggctgttgtc
gatagtgaagaagaattttcagcaattacactaaatgcagatgatgctattattcttaaa
gccaatactgaagaggaagaatcgcatttggcattattaaagctgattgaaaagaaatcg
aaaggtaattgtctttggacaaaagcaatgactgaagaatcggaaatcttaaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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