KEGG   Mannheimia varigena USDA-ARS-USMARC-1296: X808_18760
Entry
X808_18760        CDS       T03027                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
mvi  Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:mvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mvi03009]
    X808_18760
Enzymes [BR:mvi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     X808_18760
Ribosome biogenesis [BR:mvi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    X808_18760
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AHG76396
UniProt: W0QCY9
Position
1976647..1977609
AA seq 320 aa
MTTEKVISAAVQFFTISEDEAGQRLDNFLLAKLKGVPKSLIYRIVRKGEVRVNKGRIKPE
YKLQPDDVVRVPPVRVAEKNEAPISTKLNKVAELEKQILYEDDVMLVINKPSGIAVHGGS
GLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRSLHEQLREKVVQKDYL
ALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKPSETRFSIEERYANATLVKASPV
TGRTHQIRVHTQYAGHPIALDDKYGDNDFDSKMKEAGLHRLFLHAYSIRFEHPRTGEEMV
ITAQLDKALKGVLAKLRTEK
NT seq 963 nt   +upstreamnt  +downstreamnt
atgacaacagaaaaagtaattagtgccgcagtgcaattttttaccatcagtgaagatgaa
gccgggcagcgtttagataattttttattagcgaaactgaaaggcgtgccgaaaagcctg
atttaccgcattgtgcgtaagggcgaggtgcgagtgaacaaagggcggattaagcccgag
tataaacttcagcccgatgacgtggtgcgtgtgccgccagtgcgtgtggcggagaaaaac
gaagctccgatttccaccaagctcaacaaagtcgcagaattggaaaagcaaattctgtat
gaagatgacgtaatgttggtcatcaacaaaccgtcaggcattgcggtgcacggcggcagc
ggtttgagctttggtgtgattgaagcgttaagggcgttacgtccacaagcccgtttttta
gagctggtgcaccgtattgaccgtgatacctcgggtattttgctggtagcgaaaaagcgt
tctgcgttgcgtagcctacacgaacagttacgggaaaaagtggtgcaaaaagattactta
gcattagtgcgaggtcagtggcaggctcacaccaaagtgattaaagctccgttgctaaaa
aacgaattggcaagtggtgaacgtattgtgcgagtgagtgaagaaggcaaaccttctgaa
actcgttttagcattgaagagcgttatgctaatgctacattggtgaaagcctcaccggtg
acaggcagaacccaccaaatccgtgtgcatacccaatacgccggacacccaattgcgttg
gatgacaaatacggcgacaatgatttcgacagcaaaatgaaagaagccggtttacaccgt
ttatttctacacgcttattccatccgttttgaacatccgagaacaggggaagagatggtg
attaccgcacagctagataaagccttaaaaggcgtgttggcgaaattaaggacggagaaa
tag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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