KEGG   Mannheimia varigena USDA-ARS-USMARC-1296: X808_5100
Entry
X808_5100         CDS       T03027                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
mvi  Mannheimia varigena USDA-ARS-USMARC-1296
Brite
KEGG Orthology (KO) [BR:mvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mvi03009]
    X808_5100
Enzymes [BR:mvi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     X808_5100
Ribosome biogenesis [BR:mvi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    X808_5100
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: AHG75033
UniProt: W0QCT1
Position
551285..552421
AA seq 378 aa
MDASASAYSDACESDKRNFMTTFQKKPTHNARSDKRGDSRPSFKKEDQKSERKFGKSTEK
PQRPTSKPLAAKVAKKVVKTTASDAAKGAENQEKKAKVVGEKLQKILARAGQGSRRELEE
IIAAGRVSVDGKIATLGDRVQVSSSTKIRIDGHLINLISTQKEICRVLMYYKPEGELCTR
SDPEGRATVFDRLPRLTGSRWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSV
RVFGNIDDGMLQRLRKGVQLEDGPANFKQIKVVGGTGLNQWFDVTLTEGRNREVRRLWES
QGVEVSRLIRIRYGNIKLDKGLPRGGWEEMGLEQVNYLRELVGLPAETETKVDVTANRRR
TNIRQIRKAVKQHQKYRG
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggacgcatcagcgtccgcatattcagacgcttgtgaaagcgacaaaaggaactttatg
acaacttttcaaaagaaaccaacccacaacgctcgctcggacaaacgtggcgatagccgt
ccttctttcaaaaaagaagatcaaaaatcagaacgtaaattcggcaaaagcacggaaaaa
ccgcagcggccaacctcgaaacctttagccgccaaagttgcaaaaaaagtcgtaaaaacg
accgctagtgacgctgcaaaaggggcggaaaaccaagagaaaaaagccaaagtggtgggt
gaaaaactgcaaaaaatcttggctcgtgcagggcaaggttctcgccgtgaattagaagag
atcattgccgcagggcgtgtgagcgtagacggcaaaattgctaccttgggtgaccgtgta
caagtgagttcttccaccaaaattcgtattgacggacatttgatcaacttaatttctacc
cagaaagagatctgtcgtgtgttgatgtattacaaaccggaaggcgaactttgcactcgt
tcagaccctgagggcagagcaaccgtatttgaccgcttgcctcgcttaaccggttcacgc
tggattgcggtagggcgtttggatatcaacacctcgggcttattgctgttcacgacagac
ggcgagctggcaaaccgcttaatgcacccgagccgtgaggtggagcgtgaatattcggtg
cgtgtgtttggtaatatcgatgatggaatgttgcaacgcttacgcaaaggtgtgcagctg
gaagacggcccggcaaacttcaagcaaattaaagtggtgggcggaacaggcttaaaccaa
tggtttgatgtgaccttaactgaagggcgtaaccgtgaagttcgccgtttgtgggaatct
caaggggtggaagtgagccgcttaattcgtattcgctacggcaatatcaagctcgacaaa
ggcttgcctcgtggcggttgggaagagatgggcttggagcaggtaaactacttgcgtgag
ttggtcggcttaccagcagaaacggaaaccaaagtggacgtgactgcaaaccgccgccgt
accaatattcgccagatcagaaaagcggtaaaacaacatcaaaaatatcgtggttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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