KEGG   Myxococcus xanthus: MXAN_2479
Entry
MXAN_2479         CDS       T00366                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mxa  Myxococcus xanthus
Pathway
mxa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mxa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MXAN_2479 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mxa03021]
    MXAN_2479 (rho)
   03019 Messenger RNA biogenesis [BR:mxa03019]
    MXAN_2479 (rho)
Transcription machinery [BR:mxa03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MXAN_2479 (rho)
Messenger RNA biogenesis [BR:mxa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MXAN_2479 (rho)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind AAA_25 AAA_22 NACHT Spore_III_AA ResIII
Other DBs
NCBI-ProteinID: ABF86593
UniProt: Q1D9H4
Position
complement(2885918..2887618)
AA seq 566 aa
MGRQGAPGNGGSACSSPGPRVRFLSHGLSHLASPPSSWSGRPGRTQSGTFMSENPDNRDP
RDAPPVPAARAVAPPEPDDDGGDEGDDEGPDDGDSGGGAQGGAPGQPGQATGRRRRRRRR
RRGAQVLFTPDGQAYRMQPGADGQQVQVFLTPQELEQYRQRQAQQQQQQQQPPQPAHGGG
GQQHARHAQHGGGGQQASQQANLSPVEGVLDTEAKGPNAFLRQLKRNLLAAPDDPELPKN
LVQKLRLRQGQYITAFAQMRGHKGVIQKVDTVDGRPLEGAPRLPHFADLTSVDPTERLKL
ENGHKEMVTRVLDLISPIGKGQRALIVAPPKTGKTIMLQRIAQAILSNHPECHVMVVLID
ERPEEVTDMRRGIKAEVLASSSDRPTADHLKVAELALERARRLVESGKDVVVLLDSITRL
ARAFNKEVDNSGRTMTGGVDSRALERPKRLFGAARATEEAGTLTIIGTALIDTGSRMDEV
IFEEFKGTGNSEVTLDRLLAEKRVFPAVNIAQSGTRKEEKLFTLREYEKVKKLRQMLFSV
KPVEAMEALVKRLSRYTYNDEFLDEL
NT seq 1701 nt   +upstreamnt  +downstreamnt
ttgggccgccagggtgctccaggaaacggcggttcggcctgctcgtcaccagggccccgc
gtccgcttcctgtcccacggcctgagtcaccttgcgtccccgccctcctcgtggagcggc
cgcccggggcgcacacagtctggaacgttcatgagcgaaaaccccgataaccgcgaccca
cgtgatgccccccccgttcccgccgcccgcgccgtggcgccgcccgagccggacgatgac
ggtggcgacgagggcgacgacgaggggcccgacgacggtgattccggcgggggcgcacag
ggtggcgcccccgggcagcctggccaggccaccggccgccgccgccgccgtcggcgccgt
cgccgtggcgcgcaggtcctcttcaccccggacggccaggcctaccggatgcagcctgga
gcggacggccagcaggtccaggtgttcctcacgccgcaggagctggagcagtaccgccag
cgacaggcgcagcaacaacagcaacagcagcaaccaccgcagccggcgcacggcggcggg
ggccagcagcacgcccgccacgcgcagcacgggggcggcggccagcaggcctcgcagcag
gcgaacctgtcgccggtggagggcgtgctggacacggaggccaagggccccaacgccttc
ctgcgccagctcaagcgcaacctgctggcggcgccggatgacccggagctgccgaagaat
ctggtccagaagctgcgcctgcggcagggccagtacatcaccgctttcgcgcagatgcgg
ggccacaagggcgtcatccagaaggtggacacggtggacggccggccgctcgagggcgcg
ccgcggctgccgcacttcgcggacctgacgtcggtggaccccaccgagcggctcaagctg
gagaacggtcacaaggagatggtgacccgggtgctggacctcatctcgcccattggcaag
ggccagcgcgcgctcatcgtcgccccgcccaagacgggcaagacgatcatgctccagcgc
atcgcccaggccatcctctccaaccacccagagtgccacgtcatggtggtgctcatcgac
gagcgtccagaagaagtgacggacatgcggcggggcatcaaggcggaggtcctggcctcc
agctccgaccgccccaccgcggaccacctcaaggtggcggagctggccctggagcgcgcg
cgccggctggtggagtccggcaaggacgtggtcgtcctcctggactcgattacgcgtctg
gcccgcgccttcaacaaggaggtcgacaactccggccgcaccatgaccggcggcgtggac
agccgcgccctggagcgccccaagcgcctcttcggcgccgcccgcgcgacggaggaggcc
ggcacgctgaccatcatcggcacggcgctcatcgacaccggcagccgcatggacgaggtc
atcttcgaggagttcaagggaacgggtaactccgaggtcaccctggaccggctcctggcg
gagaagcgcgtcttcccggccgtcaacatcgcccagtccggcacgcgcaaggaggagaag
ctcttcaccctgcgcgagtacgagaaggtgaagaagctgcggcagatgctcttctccgtg
aagccggtggaggccatggaggcgctcgtgaagcggctgtcccgctacacgtacaacgac
gagttcctcgacgagctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

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