KEGG   Myotis davidii (David's myotis): 102754778
Entry
102754778         CDS       T02992                                 
Symbol
UPF3B
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog B (yeast)
  KO
K14328  regulator of nonsense transcripts 3
Organism
myd  Myotis davidii (David's myotis)
Pathway
myd03013  Nucleocytoplasmic transport
myd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:myd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102754778 (UPF3B)
   03015 mRNA surveillance pathway
    102754778 (UPF3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myd03019]
    102754778 (UPF3B)
Messenger RNA biogenesis [BR:myd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     102754778 (UPF3B)
   mRNA cycle factors
    P-body specific factors
     102754778 (UPF3B)
SSDB
Motif
Pfam: Smg4_UPF3 RRM_1
Other DBs
NCBI-GeneID: 102754778
NCBI-ProteinID: XP_006758002
UniProt: L5M8R0
Position
Un
AA seq 483 aa
MKEEKDYRPKEKRVTLLTPPGATGSGSGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIERVPERDKLKEEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLSDERASGQSCTLPKRCDGEFKDEKPKRPEDESGRDYRERERDYERDQERIL
RERERLKRQEEERRRQRERYEKEKAFKRKEEEIKKEKEALRDKGKKTESTESLASLEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDGTKSGDSAIEKKQESGISHRKED
GEE
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgaaggaagagaaggattataggcctaaggagaagcgagtaaccctcttgactcccccg
ggggccacaggcagtggtagtggggcttcgggggacagcaccaaaggggaagataagcag
gatcggaacaaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgcccgagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgcaatagtagagtttgctccttttcaaaaagctgca
aaaaagaagactaagaaaagagatactaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgctgataatgagaaaatgacatctactccagagacg
ctgctagaggaaatagaagctaaaaatagagaactaatagctaaaaagacaaccccacta
ttgagcttcctgaaaaacaagcagagaatgagagaagagaaaagagaagaaagaaggcgg
cgagaaatagaaagaaaaagacaaagagaagaagagaggaggaaatggaaagaagaagag
aaacgaaaaaggaaagatatagaaaagctaaagaagatagaaagagttccagaaagggac
aaattaaaggaagaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaagggggatgaaaaagaattggacaaaagagaaaag
gccaagaaattggacaaagagaatctgagtgatgaaagagccagtgggcaaagttgtaca
ttgcccaaacgttgtgatggcgaatttaaagatgaaaagcctaagagacccgaagatgag
agtggcagagactaccgggagagggaacgggattatgaacgcgatcaagagcgcattctt
cgggaaagagagagactaaagcgtcaagaagaagaacgccggaggcagagggagcgctat
gagaaagagaaggcttttaaaagaaaggaagaagaaattaaaaaagagaaagaagcactt
cgggataaaggaaagaagactgaaagtacagaatcactagccagcttagaaaaaacggaa
aagaaagaggaagtggttaagagagatcgcattagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggtgctcgaagccgaaatcgactctgtccccctgatgacggcaccaag
tctggagattcagcaatagaaaaaaagcaggaaagtggtattagccatagaaaagaagac
ggagaggagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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