KEGG   Mizuhopecten yessoensis (Yesso scallop): 110445362
Entry
110445362         CDS       T05079                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
myi  Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:myi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110445362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:myi03041]
    110445362
Spliceosome [BR:myi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    110445362
 Complex C
   U5 SnRNP specific factors
    110445362
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 eIF2A Ge1_WD40 Cytochrom_D1 Nbas_N WDR54
Other DBs
NCBI-GeneID: 110445362
NCBI-ProteinID: XP_021345609
Position
Unknown
AA seq 346 aa
MDYKRKLTDGALVPSKKPRTDMVVDLISQENALLQTGPPRLSNLEAPIMLLTGHEGDIFT
TKFSPDGQLLASSGFDRLIYFWLVYGECENIAVLKGHTGAVMELQFSTDGNTVFTAATDK
TVALWDVEVGERIKKLKGHQSFVNSVNVARRGPQLICSGSDDGTIKLWDSRKRGVIQTFQ
STYQVTACTFNDTAEQILSGGIDNDIKVWDLRKNDMLYRLRGHADTVTGMELSPDGSYLL
SNSMDNTVRVWDIRPFAPQERCVKILQGHQHTFEKNLLKCAWAPDGSKVSAGSGDRYVYV
WDTTTRRILYKLPGHAGSVNDVDFHPTEPIIASCSSDKKIFLGEIE
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggattataaaagaaagctcacagatggggccttagtgccgagtaaaaagccaagaacc
gacatggtggtcgatttaataagtcaagagaatgccctgttgcaaaccggcccaccaaga
ctttctaaccttgaagcccccatcatgttactgacgggccatgaaggtgacatattcact
actaaattttctcctgatggacaacttcttgcctcctctggatttgacaggctgatttat
ttttggcttgtgtatggagaatgtgaaaatattgcagtcctgaaaggccacaccggggct
gtgatggagcttcagttttccaccgatggaaacacagtgtttacggccgccacagacaaa
actgttgcattatgggacgtagaggttggtgagcgcatcaagaagttgaaaggtcaccag
agttttgtgaattcagtaaacgtggccagacgaggtccacagctaatctgtagtggaagt
gacgacggtacaataaagttgtgggactcgaggaagcgcggtgtaatacagacgtttcag
agtacgtaccaggttacagcatgtaccttcaacgacacagccgaacaaatcctctccggg
ggaatcgacaatgacatcaaggtttgggaccttaggaagaatgacatgctgtaccgactg
cgaggacatgccgacacagtgacagggatggagctgagtcctgacggatcctatctcctc
tccaactccatggacaacacagtgagagtgtgggacatcagaccgttcgcgccacaggag
cgatgtgtgaaaatattacagggacatcaacatacatttgaaaagaatctcttgaaatgt
gcttgggctccggatggaagcaaggtgtcggctgggtcaggtgaccgttacgtttacgta
tgggacacgaccacacgtcggatcctctacaagctgcctggtcacgctgggtcagtgaac
gacgtggatttccacccaacagaaccaatcattgcttcctgttcgagtgacaagaagata
ttcctaggagagatagaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (98)   
   KEGG ORTHOLOGY (1)   
   RefGene (94)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (112)   

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