KEGG   Myroides sp. ZB35: BK054_06915
Entry
BK054_06915       CDS       T04543                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
myz  Myroides sp. ZB35
Pathway
myz03030  DNA replication
myz03430  Mismatch repair
myz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:myz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BK054_06915
   03430 Mismatch repair
    BK054_06915
   03440 Homologous recombination
    BK054_06915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:myz03032]
    BK054_06915
   03400 DNA repair and recombination proteins [BR:myz03400]
    BK054_06915
Enzymes [BR:myz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BK054_06915
DNA replication proteins [BR:myz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BK054_06915
DNA repair and recombination proteins [BR:myz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BK054_06915
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 RNase_T Intimin_C
Other DBs
NCBI-ProteinID: APA91957
Position
1526761..1531287
AA seq 1508 aa
MYLIFDTETTGLPKSWQAPITDTDNWPRCIQIAWQLHDEYGKLIEHQDYLIKPEGFNIPY
DAERIHGISTELAEQDGISLMEALEKFNIALSKTKFIVGQNAGFDVNIMGCEFYRKGVNS
IMSELPVLDTCTEVTAEMLKLPGGRGGRYKLPTLTELHTFLFGEKFAEAHNATADVEATT
RCFLELIKHGTFSTQELQQDEEYIVRYREANPQPFQLIGLKHINLKKASEEIRKRLAKLE
GGASEEVSDHEKELLDQANFAHLHVHTQFSILQSTIAINNLVKKAGDCDMSAVAMTDHGN
MMGAFHFVMAVNNHNKGIEAKNKERAENGEEPLQTLTPIVGCEFFICENHTDKTKKDNGY
QVVLLAKNKNGYHNLAKMASIAYTDGFYYVPRIDKQVVEQYKEDVMVLTGNLYGEVPGKI
LNVGERQAEEALLWWKEQFGEDLYVELMRHNQEDENRVNKALIELARKHDVKLIATNNAY
YLDKKDANAHDILLCVKDGEKQSTPIGRGRGYRYGLPNQEYYFKSTEEMKELFSDLPDAI
YNIQEVVDKVEPFVLHRDVLLPKFDIPEEFQDARDLEGDGSGKRGENNFLRHLTYKGAEA
RYPEVTEEIRERLDFELATIERTGYPGYFLIVQDFIAAAREMGVSVGPGRGSAAGSAVAY
CLGITNLDPIEYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGANQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPSKWNLNRFLTEDENAIKGVLRSEE
FDKVKELIALAQEGSLAAETIQQAKILEGSMRNTGIHACGVIITPDDITKFVPVTLAKDS
DLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTIKLVKYRTGIDIDPDKIPIDDVKTYE
LFQRGETIGVFQYESAGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIRRKNGEEP
IVYDLDACEEYLQETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQKDVLDKMKP
KFVEQASAKGHDATTLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAA
VLSNNMNDIKSVTFFMEECKRMGLQVLGPDVNESFYKFTVNDNYEIRFGMGAIKGVGQGA
VNTIVENRKDGLYTSVFDLSKRIDLRSANKKAFENLALAGGFDCFKNTHRAQYFHTDPSD
NIVFLEKAIRYGAKSQENDNSSQFSLFGESSEVQIPEPLLPICEEWSTMEKLAKEKEVVG
IYISGHPLDDFKFEMRYFCNVKVEELTDLNPFTGRNLMFGGMISDVQFRTSAKGKDWAMF
TIEGYDESFEFRMFNEEFLKFRHFLLNNTFVYIKILVKDGWVNKDTGEKSEPRIQFLEMK
LLHEVIPTYAKKLTVVMNVKDVASRQAELIKDAFSRYQGDSFVNFEVLEVERIEKEATPV
AVPQLRMNEGDEEDGASESFDMDEPIAVDVPEFRVVNRLEFTSRNSRVNITAELLEELEA
LQVDFKLN
NT seq 4527 nt   +upstreamnt  +downstreamnt
atgtatttaatttttgataccgaaaccacagggcttcctaaaagttggcaggcgcccatt
accgatactgataactggcctcgatgtatacagatcgcttggcagttacacgatgagtat
ggtaagctgatagagcatcaagattatctgattaagccagaaggatttaatattccttat
gatgcagagcgcatacatggtatctcaacagaattagcagagcaagatggtatttctcta
atggaagcattggagaagtttaatattgcactgtctaagactaagtttatcgtcggtcag
aatgctgggtttgacgtgaatattatgggatgtgagttttatcgtaagggggtgaatagt
attatgtcagagctacctgtactggatacgtgtacagaggtgacggctgagatgctaaag
ctacctggaggtagaggaggtagatataagcttcctacattgacagagctgcatacattc
ttatttggtgagaagttcgctgaggcacataatgctactgctgacgtggaggcgactact
cgatgtttcttagagttaatcaagcatggaacattctctactcaagagttacagcaggat
gaggagtatatcgtgcgttaccgcgaggctaaccctcagccatttcagctgattggtctt
aaacatattaacttaaagaaggcgtctgaagagattcgcaagcgactggcaaaactagaa
ggaggagcatctgaagaagtgtctgatcacgagaaagaattattagatcaggcgaacttc
gcacacttacacgtgcatacacagttctctatcttacagtctacgatagcgattaataat
ctagtgaagaaggctggtgactgtgatatgtctgctgtagcgatgacggatcacggtaat
atgatgggagcattccacttcgtgatggctgtgaataaccataataaggggatagaggct
aagaataaagagcgcgctgagaatggagaggaaccattacagacactgacacctatcgtg
ggatgtgagttctttatctgtgagaatcatacggataagactaaaaaagacaatggatat
caagtagtattacttgctaaaaataaaaatgggtatcacaatctagcgaagatggcttct
atcgcttatacagacgggttctactatgtacctcgtatcgataagcaggtggtagagcag
tataaagaagatgtgatggtactgacgggtaacttatatggggaggtacctggtaagata
ttaaacgtaggtgaacgccaagctgaagaagccctactatggtggaaagagcagttcggc
gaggatctatacgtagagttgatgcgacataatcaagaggatgagaatcgcgtgaacaag
gcattgatagagctagcacgtaaacacgatgtgaaactgatagcgactaataatgcttat
tatttagataaaaaagatgcgaatgcacacgacattctattgtgtgtgaaggatggtgag
aagcagtctactcctatcggtagaggtagaggctatagatatggtcttcctaatcaggag
tactactttaagtctactgaggagatgaaggagctgttctcagacttgcccgatgctatc
tataatatacaagaggtagtggataaggtggagccattcgtgctgcaccgcgatgtatta
ctacctaagttcgatataccagaggaatttcaagatgcgcgagatttagaaggagatgga
agtggtaaacgcggagagaataacttcttaagacaccttacttataaaggggcagaggcg
agatatcctgaggtgacagaggagatccgagagcgactagacttcgaactagcgactatc
gagagaactgggtatcctggttatttcttgattgtacaagactttatcgcagcagcgaga
gagatgggagtgtctgtaggtcctggtcgtggttcggctgcgggttcggctgtggcatac
tgtctaggaattacgaatctagatcctatcgagtatgatttgctttttgagcgtttcctt
aaccctgaccgtgtatcgatgcccgatatcgatattgacttcgatgatgaaggtcgtggt
cgtgtaatggattatgtaatcaataaatatggagctaatcaggtagcacagattatcacg
tatggtaagatggcgactaagtctgcgattagagatacggctagggtgttagacttaccg
ttattcgaggcagatagaatcgcgaagcttatcccaggtatgatgccatctaagtggaat
ctgaatcgattcttaacagaggatgagaacgctataaaaggagtgcttcgatcagaagaa
tttgataaagtaaaagaattaatagccttagctcaagagggatcattagctgcagaaact
atacagcaagctaagatactagaagggtcaatgcgtaatacgggtattcatgcctgtggg
gtaattattactcctgatgatattacgaagttcgttccagtaactctagctaaagactca
gacttatatgtaacgcagttcgacaactcggtagcagagagtgcaggtctactaaagatg
gacttcttagggttaaaaacattaacccttattaaggacacgattaaactagtgaagtat
cgtacaggtatagatatagacccagataagatacctatcgatgatgtgaagacctacgag
ctgttccagagaggtgagactatcggggtgtttcagtacgagtctgcaggtatgcagaag
tatatgcgtgaactgaagcctactgtatttgccgatctgatagcgatgaatgcactgtat
cgtccagggccactagagtatatcccttcgtttattcgtcgtaagaatggggaagagcct
atcgtatatgatttagatgcatgtgaagaatacttacaggagacgtacggtattacggta
tatcaagagcaggtgatgcttctgtcgcagaagttggctggattcactaaaggtgaggct
gatgtactgcgtaaggcgatgggtaagaaacagaaggatgtactagataagatgaagcca
aagttcgtagagcaggcttctgctaaaggacatgatgctactacactagagaagatatgg
aaagactgggaagcctttgcttcttatgcgtttaacaagtctcactcgacctgctatgca
tggatagcgtatcagacagcgtatctgaaggcacactatcctgcggagtatatggcggct
gtactgtctaataatatgaatgatatcaagtcggttaccttcttcatggaagagtgtaag
cgcatgggactacaagtattaggacctgatgtgaatgagtcattctacaagtttacagta
aatgataactatgagattcgcttcggtatgggagcaattaaaggagtaggacaaggggct
gtaaatactatcgtagagaatagaaaagatgggttatacacctcagtattcgatctatcg
aagagaatagaccttagatctgctaataagaaagcttttgagaatcttgctttagcagga
ggttttgactgttttaaaaacacacatagagcacagtacttccacacagacccaagtgat
aatatcgtgttcttagagaaagctatacgctatggggctaagtctcaggagaacgataat
tcttctcagtttagtctatttggggagagtagtgaagtacaaatacctgagcctttatta
cctatctgtgaggaatggagtacgatggagaagttggcgaaggagaaagaggtagtaggg
atttatatctcaggacatcccttagatgactttaagtttgagatgagatatttctgtaat
gtgaaggtagaggagttgacagacttaaatcctttcacagggcgcaatttgatgttcgga
ggaatgattagtgatgtacagttccgtacttctgctaaagggaaagattgggctatgttt
actatagaaggttatgacgagagctttgagttcagaatgttcaatgaggagttcttgaag
tttagacatttcttattaaacaatacatttgtatacattaagatattagttaaggatggt
tgggtaaataaagatacaggagagaagagcgagcctcgtattcagtttttggaaatgaag
ttattacatgaagtaatccctacttatgctaagaaacttactgtagtgatgaacgtaaaa
gatgtggcttctaggcaagcggagttaatcaaagatgcttttagtagatatcaaggggat
agctttgtaaacttcgaggtactagaggtagaacgaatagagaaagaagctactcctgta
gcagtgccacagctaagaatgaatgaaggagatgaagaggatggtgctagtgaaagcttt
gatatggatgagcctatagcggtggatgtaccagagtttagagtagtgaatagattagag
tttaccagtcgcaatagtagagtgaatatcacagcagaattactagaagaactggaagcc
ttacaagtagattttaaattaaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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