KEGG   Maylandia zebra (zebra mbuna): 101473584
Entry
101473584         CDS       T02814                                 
Symbol
polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze03020  RNA polymerase
mze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101473584 (polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101473584 (polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mze03021]
    101473584 (polr2i)
   03400 DNA repair and recombination proteins [BR:mze03400]
    101473584 (polr2i)
Transcription machinery [BR:mze03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101473584 (polr2i)
DNA repair and recombination proteins [BR:mze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101473584 (polr2i)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Ogr_Delta Zn_ribbon_recom TF_Zn_Ribbon DZR Zn_Tnp_IS1595 Lar_restr_allev zf-C4_Topoisom GpA_ATPase
Other DBs
NCBI-GeneID: 101473584
NCBI-ProteinID: XP_004544029
UniProt: A0A3P9C672
Position
LG14:complement(13212271..13219573)
AA seq 126 aa
MDLDGGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVSQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggatttagacggtgggacgtacgagccgggatttgttggcatacggttttgtcaagaa
tgtaacaacatgttgtatcctaaagaagacaaggagaaccgcatcctgctgtatgcctgc
aggaactgtgactaccaacaagaggcagacaacagctgtatctacgtcaataaaatcacc
catgaggttgatgaactcacacaaatcatcgctgatgtatctcaggacccaacactgcca
agaacagaagaccacccctgccctaaatgtggtcacaaggaggcggtgttcttccagtct
cacagtatgaaggctgaggatgctatgcgactgtactacgtgtgcacggcgcctcactgt
ggacaccggtggacagagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (43)   

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