KEGG   Maylandia zebra (zebra mbuna): 101487926
Entry
101487926         CDS       T02814                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
mze  Maylandia zebra (zebra mbuna)
Pathway
mze04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:mze00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    101487926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mze03019]
    101487926
   03041 Spliceosome [BR:mze03041]
    101487926
   03036 Chromosome and associated proteins [BR:mze03036]
    101487926
Enzymes [BR:mze01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101487926
Messenger RNA biogenesis [BR:mze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     101487926
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101487926
Spliceosome [BR:mze03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    101487926
Chromosome and associated proteins [BR:mze03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    101487926
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 101487926
NCBI-ProteinID: XP_004573898
UniProt: A0A3P9BP84
Position
LG23:38277488..38299456
AA seq 741 aa
MSHVAVENAHGLEQQLAVLDLSAADGQGGGNSRRYIPPHLRNKDAPKNAGNAFAAGRQGG
YTIAPAANYGWDGTRNNFVNGYHDNRMTGNSFNRGPPRMERGRGGVGGGYRNNRGGAFNP
INPAQPMGFAGYENKDAGGWNTAKDAYSSFGNNRGKSAFFNDRGNASRGRFEHGGFGNGG
GGGGNSRWVEESRDDGDWSKPTPRNERLEHELFSGSNTGINFEKYDDIPVEATGQNCPQH
IESFQDVDMGEIIMGNIALSRYTRPTPVQKYAIPIIKSKRDLMACAQTGSGKTAAFLLPV
LSQIYTDGPGEALNAAKASGQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSR
VRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLD
MGFEPQIRRIVEQDTMPPKGIRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSEN
ITQKVVWVEESDKRSFLLDLLSATAIPSEVQDSTGDNIEKPGKDSLTLVFVETKKGADAL
EDFLYREGYACTSIHGDRSQRDREEALNQFRSGKCPILVATAVAARGLDISNVKHVINFD
LPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYE
HQHKSSNRGRSKRFSGGFGARDYRQTAAGVNAGGFGGRGGGRSQAGHGGNRAFGGGGFSN
FYTSDGYGGNYSHSQVDWWGN
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgagtcatgtggccgtcgaaaatgcccacggtctagaacagcagctcgctgtcctagac
ttgagcgctgcagacggacaaggtggtggcaatagcaggcgatatatacctccacattta
aggaacaaagatgctcccaaaaatgcaggaaatgcctttgctgctgggcgacagggtggt
tacaccatcgcgcctgcagccaactacggctgggacggcacgcgcaacaactttgtcaac
ggctaccacgacaatcgcatgacgggcaactcatttaaccgtggcccgcctcgcatggag
cggggaagaggtggcgttggaggtggttaccgcaacaacaggggtggagccttcaacccc
attaacccagcacagccaatgggctttgctgggtatgaaaataaagacgcaggtggctgg
aacactgccaaggacgcctatagcagttttggcaataaccgtggaaagtctgctttcttc
aatgacagaggcaacgctagccgaggaaggtttgagcatggaggatttggtaatggagga
ggaggaggaggaaacagccgctgggtggaggaatccagagatgacggagactggtccaaa
ccaacccctcgcaacgaacgccttgaacatgaattgttctctggcagtaacactgggatt
aactttgagaaatacgatgacattcctgttgaggccacgggacagaactgccctcagcac
atcgagagtttccaagacgtggacatgggtgagattatcatgggtaacattgctctgagt
cgctacaccagacccactcctgtccagaaatacgccattcctattattaaatcgaagaga
gacctcatggcctgcgcacagacaggctctgggaaaacggcagcattcctcttgccagtc
ctcagccagatctacactgatggaccaggagaggcccttaacgcagctaaagcatcagga
caggagaatggaaagtatggccgtcgcaagcagtaccccatctccctggtgctggctccc
accagagaactggcactgcagatatatgatgaagcaaggaagttttcctaccgctccaga
gtgcgtccctgtgttgtgtatggaggagcagacattggccagcagatcagagacctggag
agaggctgtcacctgctggtggccactccaggaagactcgtggacatgatggagagaggg
aagatcggactggactactgcaactacctggtcctagatgaggctgaccgtatgctggac
atgggctttgaaccacagatacggcgcatcgtcgaacaggacaccatgcctcctaaaggc
atccgacaaactatgatgttcagcgctacgtttcccaaagaaatccagatcttagctcgg
gatttcctggaggattacatcttcctggcggtgggcagagtgggttccacctcggagaac
atcacgcagaaagtggtgtgggtggaagagagtgataagcggtctttcctcttggacctg
ctaagcgctacagccatcccaagtgaggtacaggacagtactggagacaacatagagaaa
cctggtaaggactcattgaccctggtttttgtggagaccaagaaaggtgcagacgccttg
gaggacttcctatatcgggaaggctacgcctgcaccagtatccatggtgaccgttcccag
agagatcgagaggaggccctgaaccagttcagatcaggaaaatgtcccatcctggtggct
acagcggtagcagctcggggtttggacatctccaacgtgaaacatgttattaactttgac
ctgccaagcgacatagaggagtacgtccaccgtattggacgtacgggacgagtaggaaac
ctggggctggcaacatcattcttcaatgacaaaaacgggaacatcactaaagacctcctg
gacatcctagtagaggccaaacaggaagttccctcatggctcgagagcctggcctatgaa
caccagcacaagagtagtaatagagggcgctctaagaggttctctggcgggtttggagca
cgagattatcgtcagactgctgcaggagtcaacgccggagggtttggaggacgtggagga
ggacgcagccaggcaggacatggaggaaaccgtgcctttggaggaggcggcttcagcaac
ttctacaccagtgatggctacggaggaaactactcacactctcaagttgactggtggggc
aactag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (45)   

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