KEGG   Candidatus Nanopusillus acidilobi: Nps_03085
Entry
Nps_03085         CDS       T04255                                 
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
naa  Candidatus Nanopusillus acidilobi
Pathway
naa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:naa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nps_03085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:naa03019]
    Nps_03085
Messenger RNA biogenesis [BR:naa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Nps_03085
SSDB
Motif
Pfam: Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_6 W2
Other DBs
NCBI-ProteinID: AMD30016
Position
535792..537120
AA seq 442 aa
MEIEIFPIGGYSYIGKNMSAIRIDDKIIIIDIGINVDKISQFGEREDITDKPLKELYDLD
IIPDDSILENYKDKVKAIILTHGHLDHIGAVNFIAPKYNAPIYASPYTIELIKQQEKEYG
IVLPNDLKKISPNSSIKISEDISINFINITHSIPQSLMIDIQTNKGHIVFSGDFKFDNFP
IIGKKPDKEKLKKIGKEGVLLLISETTRADENSKSQSEIIEKYMLYDVLNSIDTKGIIIT
TFSSHIARLKSIIELSKEINRKPIFIGRSLGKYISAAENINLYNFSQEAEVYFDPRDYKK
VFERVEKNKEEYLLIVTGHQGEPGSVLDRLARGEYNFDLSNTTIIFANNVIPHPINEANR
KILEERLKRKKAEIIKDVHISGHAKSQDHIMLLKMLDPEYIIPNHGDINKKASYYNIVSD
YGYTLGEDVFFLEDYQRKIFNI
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggaaattgaaattttcccaataggtggatattcatatataggaaaaaatatgagtgca
ataagaattgatgataaaataattataatagatattggaataaatgtagataaaatatct
caatttggagaaagagaagatataacagataaaccattaaaggaattatatgatttagat
ataataccagatgactcaattttagaaaattataaagataaagtaaaggcaataatatta
acacatgggcatttagatcatataggagcagtaaattttattgcaccaaaatataatgca
ccaatatatgcatctccatatacaattgaactaataaaacaacaagaaaaagaatatgga
attgtcttaccaaatgatttaaagaaaatatctccaaattcttcaattaaaatttcagaa
gatatttcaattaattttatcaatattactcattcaattccacaatcattaatgattgat
attcaaacaaataaaggacatatagtattttcaggtgattttaaatttgataatttccca
atcattggtaaaaaacctgacaaagaaaaattaaagaaaattggaaaagaaggagtttta
ttattaatttctgaaacaacaagagcagatgaaaattcaaaatctcaatcagaaattatt
gaaaaatatatgttatatgatgtattaaattcaatagatacaaaaggaataattataaca
acattttcatcacatattgcaagattaaaatcaataattgaattatcaaaagaaataaat
agaaaaccaatatttattggaagaagcttaggaaaatatattagcgcagcagaaaatatt
aatttgtataatttttctcaagaagcagaagtatattttgatccaagagattataaaaaa
gtttttgaaagagtagaaaaaaataaggaagaatatttattaattgttaccggacatcaa
ggggaaccaggttctgttttagatagattagcaagaggagaatataattttgatctaagt
aatacaacaataatatttgcaaataatgtaattcctcatccaataaatgaagcaaataga
aaaatattggaagaaagattaaagagaaaaaaagcagaaataataaaggatgtacatata
tctggtcatgcaaaaagtcaggatcatataatgttattaaaaatgctagatcctgaatat
ataataccaaatcatggagatataaataaaaaagcctcatattataatattgtatcagat
tatggatatacattgggagaagatgtatttttcttagaagattatcagagaaaaatattt
aatatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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