KEGG   Candidatus Nanopelagicus abundans: B1sIIB91_04885
Entry
B1sIIB91_04885    CDS       T05091                                 
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
nab  Candidatus Nanopelagicus abundans
Pathway
nab03420  Nucleotide excision repair
nab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B1sIIB91_04885
   03430 Mismatch repair
    B1sIIB91_04885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nab03400]
    B1sIIB91_04885
Enzymes [BR:nab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B1sIIB91_04885
DNA repair and recombination proteins [BR:nab03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1sIIB91_04885
   MMR (mismatch excision repair)
    Other MMR factors
     B1sIIB91_04885
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 AAA_30 Viral_helicase1 YflT DEAD AAA_11
Other DBs
NCBI-ProteinID: ASY24225
UniProt: A0A249L5M0
Position
complement(945487..947130)
AA seq 547 aa
MAIDNAAILADLDPDQISVVSAIRGPVCVIAGAGTGKTRVITNRIAYAINAGVTDPTKVL
ALTFTAKAAGEMRSRLRTLGISNAAARTFHSAALKQLLYFWPYAFGGQFPTLLTTKSGFI
SQAISRAEVAMPASVNALREIAGEIEWAKVLEISPDNYQEEAIASNRSVRLPNNKSENEN
LAMISQVYEAYESLKKQERCLDFEDVLLLTVGMLEEDRGVRERVRDQYRYFTVDEYQDVS
PLQQRLLNLWLGNREEICVVGDAAQTIYSFAGASSNFLLTFKNRFPNAQVFRLTRGYRCT
PEIINAANQILRQGNLVSDHGSELQSANEHGDKPKVNGFNSASDEIAYVSSEVEKLIKSQ
VDSSDIAILARTNAQLDQVKSSLNNLKITSQIRSGEKFFDRVDVRDAMRVIRSASVLPSE
IGDWYADLESVLRPFGEADYVISFLKLAKSIKENGGTNMRAFLREIEDRAEQNNPPTLPG
VTLATLHSAKGLEWKHLFLIGVSDGVLPMGNDLNEERRLFYVGVTRAKEKIQITYAGKPS
VFLEQFN
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcaatagataatgcagccatactcgctgacttagatcctgatcaaatttcagttgtt
agcgctattagaggaccagtttgtgtaattgcaggagctggtactggaaaaactagagtt
attacaaaccggattgcctatgcaattaatgctggcgtaactgatccaacaaaggtatta
gcacttacctttactgcaaaagcagcaggtgagatgagatctcggcttagaacacttgga
atatcaaatgctgcggcaagaacatttcactcagctgcattaaaacaacttttatacttt
tggccatacgcatttggtgggcaatttccaaccttactaacaacaaaatcagggttcatc
agccaggctatttcaagagctgaggtggcaatgccagcaagtgttaacgcactgcgcgag
attgctggtgaaatcgaatgggcaaaggttttagaaatatcacctgataactatcaagaa
gaagcgatcgcaagtaatagatcagttaggttgccaaataataaaagtgagaatgagaac
ctggcgatgatttcgcaagtttatgaagcctatgaatcacttaaaaaacaggagcggtgc
ttagattttgaagatgtacttttacttactgttgggatgttagaagaggacagaggcgtt
agggagcgggtaagagatcaataccgctacttcacagttgatgagtatcaggatgtttca
ccccttcagcagcgattactaaatctttggcttggaaatcgtgaggaaatatgtgtagtt
ggcgatgctgcgcaaactatctactcatttgctggggctagctcaaactttttacttaca
tttaaaaaccgattcccaaacgcgcaagttttccggctaacccgcggctatcgctgtacc
ccagagataattaatgctgccaatcaaattctgcgccagggtaatctagttagtgatcat
ggcagtgagctgcaatctgccaatgaacatggtgataagccgaaggtaaatggctttaat
tcagcctctgatgagatcgcatatgttagctctgaggttgaaaagctgattaaaagccag
gtagatagttctgatatcgcaattttggctagaaccaatgctcaattagatcaggttaag
tcctcccttaataatttaaagatcactagccaaattagatcaggtgagaagttctttgat
cgagtagatgttagagatgcgatgcgagtgattagaagtgcctcagtattaccctcagaa
ataggtgattggtatgccgatctagaatcggtgctgcgtccatttggtgaggctgattat
gtaattagctttttaaagctggctaaaagcattaaagaaaatggtggcacaaatatgcgg
gcctttttgcgagagattgaggaccgggctgagcaaaataacccacctacattgcctggg
gtaacgctagctacattacatagtgctaaaggacttgaatggaagcacctgtttttaatt
ggagtctcagatggtgtattacctatgggtaatgatttaaatgaagagcgccgccttttt
tatgtgggagttactcgggctaaagagaaaattcagattacctatgctggtaaacccagc
gtatttttagagcaatttaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

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